Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0576 ATGGAAGGAGATGCATGTTGTGGAAGTTTTTACCAGAAATGTAAGCCTTACATAGCTATGATTTCAATGCAATTTGGGTATGCAGGAATGAACATAATCACAAAGGTATCACTCAACCGTGGCATGAGTCACTATGTGCTTGTGGTTTATAGACATGCTTTTGCTACAGCAGCTATTGCTCCATTTGCTTTTGTCCTAGAGAGAAAAGTGAGGCCAAGGATTACATTTCTTATGTTCATGCAAATGTTTGTGTTGGGTCTTCTTGGGCCTGTGATTGATCAAAACTTATACTATATGGGGTTGAAATTTACTTCCCCAACATATTCATGTGCTTTAAGCAACATGCTCCCTGCAATGACATTTGTAATGGCAGTTATATTCAGGATGGAGAAGTTGGACATGAGAAAAGTAAGATGCCAAGCAAAAGTGATTGGAACTATAGTTACAGTTGCAGGAGCAATGTTAATGACATTGTACAAAGGGAAAGTCATAAACTTTTTCTGGTCTCAGTACATGCATCACCCTAGAAACTATGTACCTGAGAACACCACTAGCTCTGGTGAAAAAGATTGGGTTAAGGGTTCTGTTCTGCTCATAATTGCTACCCTTGCTTGGGCTTCTTTCTTCATCCTTCAGGCAGTGACATTAAGAAGATATTCTGCTCAGCTTTCACTCACTGCCATAGTGTGTTTCTTGGGAACACTACAATCAACTGCAGTTACATTTGTCATGGAGCAAAAGCCTTCTGCTTGGTCAATTGGCTTCGACATGAACCTATTTGCTGCAGCTTATGCTGGTATAATATCATCAGGCATTGCATATTATGTTCAAGGGATTGTCATGCAAAAAAGAGGACCAGTTTTTGTCACAGCCTTTAGCCCTTTGATGATGATCATTGTAGCCATCATGGGATCTTTTATCCTAGCAGAAAAAATATACCTTGGAGGGGTCATTGGAGCAATTGTAATTGTGATGGGACTTTACTTGGTTCTATGGGGCAAATACAAGGAGTACAAAGAAAAAGATATGGAGATAGTGACTAAGGCAATTAAGTGTTGCACAGAAGAAAATGGGAGAATGGAAACTGTGATGGAAGATGATGAAGTAAATGACATCGAGATGCAAAAGGGTGAAGCTTCTAAAGATCCAAGGCTGAACTCAATAATAGAGGCTGAAAAATGA 1182 0.3951 MEGDACCGSFYQKCKPYIAMISMQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFAFVLERKVRPRITFLMFMQMFVLGLLGPVIDQNLYYMGLKFTSPTYSCALSNMLPAMTFVMAVIFRMEKLDMRKVRCQAKVIGTIVTVAGAMLMTLYKGKVINFFWSQYMHHPRNYVPENTTSSGEKDWVKGSVLLIIATLAWASFFILQAVTLRRYSAQLSLTAIVCFLGTLQSTAVTFVMEQKPSAWSIGFDMNLFAAAYAGIISSGIAYYVQGIVMQKRGPVFVTAFSPLMMIIVAIMGSFILAEKIYLGGVIGAIVIVMGLYLVLWGKYKEYKEKDMEIVTKAIKCCTEENGRMETVMEDDEVNDIEMQKGEASKDPRLNSIIEAEK 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0576 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 335 - -
Lal10g0576 393 PANTHER WAT1-RELATED PROTEIN 10 363 - -
Lal10g0576 393 PANTHER WAT1-RELATED PROTEIN 10 363 IPR030184 GO:0016021|GO:0022857
Lal10g0576 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Lal10g0576 393 Pfam EamA-like transporter family 193 331 IPR000620 GO:0016020|GO:0016021
Lal10g0576 393 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0576 Lal-Chr10 13411068 13414121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0576 1 389 Nodulin-like Gene Family AT5G07050 63.104 9.08e-179 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0576 - - gmx:100793545 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0923 8 6879172 6881769 Lal10g0576 10 13411068 13414121 LSH