Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0541 ATGATGGGATCTCAAGGTGGGGAAATCCAAGGGCCAAACACTAGTTATGGTTCTTTGGCCAGACAAGGTTCATTGTACAATCTAACCCTTGATGAGGTGCAAAACCAGCTTGGAAATTTAGGAAAACCATTAGGGAGCATGAATCTTGATGAGTTTCTAACGAGTGTGTGGAGTGTTGAAGCTTCTCAGGTTCAGCCCTTTGGATTGGGTTCTGGTAACATGCAACAAGGTCAGAATGAGGTAGCTTCTGTGTCTTCTTTGAATCCACAGGGTAGCCTAACATTGTCTATGGATCTTAGTAAAAAAACAGTTGATGAGGTTTGGAGAGATATACAGAAGAGGAAAAGTAGTACTAGTGAGGATAAGAAAACTAAGGACAAACAACCTACACTAGGTGAGATGACCCTTGAGGATTTCTTGTTTAAGGCTGGGGTTGAAGTTGATTCAAATGTGGCTTCACAACATAATGCTTCACAACATGGTCATTGGATGCAATACCAGGTCCCTTCAGTGAAGCAACCGAATCAGCATCGAAATCAGGAGAATAATATGATGACATGTTTTATAGCTGGTCCTGCTGTTCAACAATCTTTTCATGTTGCTATGAATCCAGGATACTCTGAAACAATGATGGCTATGTCGCCATCTTCTTTAGTCGGTACGTTATCAGATCCGCAGGCTCAGGGTCGGAAAAGAGTTGCATCTGGTATTGTGGTTGAGAAAACTGTCGAGCGGAGGCAGAAGAGGATGATTAAAAATCGGGAATCTGCAGCGCGGTCACGGGCTAGAAAACAGGCTTACACACAGGAGTTGGAGATTAAAGTTTCGCGTTTGGAAGAAGAGAATGAAAGGCTTAGGAAACGTCATGAGATAGAGAGGGCGTTGCCGAGCTTGCCATCACCTGACCCTAAGCACCAGCTTCGGAGAACTAGTTCAGCTCCGATTTGA 948 0.4388 MMGSQGGEIQGPNTSYGSLARQGSLYNLTLDEVQNQLGNLGKPLGSMNLDEFLTSVWSVEASQVQPFGLGSGNMQQGQNEVASVSSLNPQGSLTLSMDLSKKTVDEVWRDIQKRKSSTSEDKKTKDKQPTLGEMTLEDFLFKAGVEVDSNVASQHNASQHGHWMQYQVPSVKQPNQHRNQENNMMTCFIAGPAVQQSFHVAMNPGYSETMMAMSPSSLVGTLSDPQAQGRKRVASGIVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSRLEEENERLRKRHEIERALPSLPSPDPKHQLRRTSSAPI 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0541 315 CDD bZIP_plant_BZIP46 245 290 - -
Lal10g0541 315 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 248 263 IPR004827 GO:0003700|GO:0006355
Lal10g0541 315 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 3 313 IPR043452 GO:0003700|GO:0045893
Lal10g0541 315 Gene3D - 243 295 - -
Lal10g0541 315 Pfam bZIP transcription factor 245 289 IPR004827 GO:0003700|GO:0006355
Lal10g0541 315 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 243 288 IPR004827 GO:0003700|GO:0006355
Lal10g0541 315 SUPERFAMILY Leucine zipper domain 245 291 IPR046347 GO:0003700|GO:0006355
Lal10g0541 315 SMART brlzneu 241 309 IPR004827 GO:0003700|GO:0006355
Lal10g0541 315 Coils Coil 261 295 - -
Lal10g0541 315 MobiDBLite consensus disorder prediction 291 315 - -
Lal10g0541 315 PANTHER BZIP TRANSCRIPTION FACTOR 3 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0541 Lal-Chr10 12916934 12920877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0541 18 315 bZIP Transcription Factor Family AT3G56850 56.646 4.91e-103 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal10g0541 bZIP_1 6e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0541 K14432 - gmx:100783666 363.999