Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0434 ATGCAAGTTCACCTGCTTGTGGGACCCATTTCCGTTTCTTCCCCTTCCGCCGTCGTTTTACCTTCTCTCCTCGATTCCAACCCCTTCCTCTCAAGTATTCCTCCGTTCTCGGCCCACCGTCGTCGCCGCTTTTCCCGCTGGTCCCCACTCGTCGTTGCATCATCCGCGGCGATCAACGGCGGACAGAACCACTACGCTGTCCTCGGCATCGCTCAGACCGCCACCTCCGCCGAGATCAAAAGGGCTTATCGCCTTCTCGCACGAAAGTATCATCCTGATGTTAGCAAGGATTCACAGGCTCCTGAATTGTTCAAGAGCATCCGTCATGCATATGAAGTTCTATCCAATGAAGCAACGAGAACTCAGTATGATAAGGAGCTTCAATTTGGTCGCAGGCCTTACCGGGAAAAATGGAGTTATAGCACTGAATTTGCAGATCAAGTAAGAATGTATAGGTGGGCCAACCTCAGGAAGAAAGTGCATAGTGAAAGATACTGGGAGCACTATTATGATGACAATGAGGGATACAATGGCAACGAAACAAATGAGGCGGAAGAAGGTGAAGGTAATTTAGACAAAGAGAGAGGTTCTTTTATTGAAGTGCTTAGATCAGCATTCATGTCACTATTTTTGTTCCAGACATTAGGGTCCCGATTGTCCCTTACATATAGCAGTGTGATGGCATTGGTTGATGAGAAGTTAGACGTCGGTTATAAAATTGGTTATGCAATAGCATGGATTTTGGGTGGAAGGAGCGGCATATTGCTTACATTATGCTTGTCATTTGCAAGTTGGGCATGTGGGAAAACCAGTAGCAGTGTAGTTGCACTGATTATGGTAGCCATGTGGGTTGGCTCCCACCTTGCAAGGTATGTACCACTTCCCCAAGGTGCCTTGTTAACACTTATTTACATGTCCATTAAGCTACAATCTGACCAATTATAA 945 0.4656 MQVHLLVGPISVSSPSAVVLPSLLDSNPFLSSIPPFSAHRRRRFSRWSPLVVASSAAINGGQNHYAVLGIAQTATSAEIKRAYRLLARKYHPDVSKDSQAPELFKSIRHAYEVLSNEATRTQYDKELQFGRRPYREKWSYSTEFADQVRMYRWANLRKKVHSERYWEHYYDDNEGYNGNETNEAEEGEGNLDKERGSFIEVLRSAFMSLFLFQTLGSRLSLTYSSVMALVDEKLDVGYKIGYAIAWILGGRSGILLTLCLSFASWACGKTSSSVVALIMVAMWVGSHLARYVPLPQGALLTLIYMSIKLQSDQL 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0434 314 Pfam DnaJ domain 63 124 IPR001623 -
Lal10g0434 314 Gene3D DnaJ domain 52 144 IPR036869 -
Lal10g0434 314 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 38 309 - -
Lal10g0434 314 PRINTS DnaJ domain signature 65 83 IPR001623 -
Lal10g0434 314 PRINTS DnaJ domain signature 83 98 IPR001623 -
Lal10g0434 314 PRINTS DnaJ domain signature 99 119 IPR001623 -
Lal10g0434 314 ProSitePatterns Nt-dnaJ domain signature. 104 123 IPR018253 -
Lal10g0434 314 SUPERFAMILY Chaperone J-domain 62 133 IPR036869 -
Lal10g0434 314 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 38 309 - -
Lal10g0434 314 SMART dnaj_3 62 119 IPR001623 -
Lal10g0434 314 ProSiteProfiles dnaJ domain profile. 63 127 IPR001623 -
Lal10g0434 314 CDD DnaJ 63 116 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0434 Lal-Chr10 10478438 10480975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0434 64 124 C2H2 Transcription Factor Family AT1G74250 40.299 4.91e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0434 - - adu:107494507 416.772