Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0425 ATGCCAGAGTTGAGAAGTGGAGCTAGAAGGTCGAAACGGCTTGGTGATCTTCAGCCTGGTTCACTACCTGTTGGTCAAGGAGAGAATTGGGTGCAACCTCCTGCTCAGAACAGAACTAGGAGGAGAGTTGGAGGTGGAAGAGGAAGAGGTGGTAATGCCACAGCTGTAGGCAAAGGGCCTTCACCAGCTGTACCCACAAGGCGAACTGCAGCTGGTAGAGGCCGCAGAACAAGAGTGATTGATCTTGATCCTGAACCTTGTGACGTTCTTCCAGAACCTGTTGCTTTAGGGGCCTTGGAACCCATTTACAATCAAGTAGAGGTAGTGGCCAATAATAATATTGTGATGGAAGGTGGAAGTGGAGACAAGGTGGTGGCAGCTGAGGAGGAAACAAGCACAACCCCAGTCCCCGAGAGGGTGCAAGTCGGTGGCTCTCCTGTATATAAGATTGAAAGGAAATTGGGTAAGGGTGGCTTCGGCCAAGTTTATGTTGGTAGAAGGATTAGTGGGGGCTCTGATCAAACAGGCCCTGATGCAATTGAGGTTGCACTCAAGTTTGAGCACAGAAACAGTAAAGGTTGCAATTATGGGCCTCCTTTTGAGTGGCAAGTTTACACTACCTTGAATGGTTGCTATGGAATTCCCCGAGTTCATTACAAGGGTCGACAAGGAGATTTCTACATTCTGGTCATGGACATCCTTGGACCCAGTCTCTGGGATGTATGGAATTCTCTTGGCCAATCGATGTCTCCAAATATGGTTGCCTGCATTGCAGTGGAGGCAATATCAATCCTTGAGAAGCTCCATTTGAAAGGGTTTGTGCATGGAGATGTAAAACCAGAAAACTTTTTGCTCGGTCAACCCGGAACAGCTGATGATAAGAAGTTATATCTTATTGATCTTGGTTTGGCATCTAGATGGAAGGACGCGTCATCTGGTCAACATGTGGACTATGACCAGAGACCTGATATATTCAGAGGAACAATAAGATATGCCAGTGTACATGCTCATTTAGGTAGGACTGGAAGTCGAAGGGATGATCTTGAGTCACTGGCATACACTTTAATATTTCTAATAAAAGGGAGGTTGCCGTGGCAGGGTTATCAGGGTGACAATAAAAGCTTTCTTGTTTGTAAGAAAAAGATGGGCACTACTCCAGAGTTGATGTGCTGCTTTTGTCCTGCTCCATTTAAGCAGTTTCTTGAAGTTGTTACCAACATGGGATTTGATGAGGAGCCAAATTATCACAAGCTTATATCACTTTTTGATAGCTTGATTGAACCATGCACTCCATTGAGACCTATTAGAATTGATGGAGCGTTAAAGGTTGGTCAAAAGCGGGGAAGGATGCTTATTAATCTGGAAGAAGATGAGCAACCTAAGAAGAAAGTTCGATTAGGGAGTCCTGCTACTCAGTGGATATCAGTATATAATGCACGCCGTCCCATGAAGCAGAGATATCACTACAATGTATCAGACACCAGGCTCCGGCAGCATGTAGACAAGGGTATTGAGGATGGGTTGTATATAAGCTGTGTTGCTTCTTCAGCAAACCTGTGGGCTTTAATCATGGATGCAGGAACGGGTTTTTCTTCCCAGGTTTATGAGTTGTCAGCAGCCTTCCTGCATAAGGACTGGATTATGGAGCAGTGGGAGAAAAATTACTATATCAGTTCAATAGCTGGTGCAGTTAATGGGAGTTCCTTGGTTGTCATGTCGAAAGGCTTGCTGTTTGTTTCTCATGATAGAAATCATTGCTTTATAGGAACTCCTTACACACAGCAATCCTACAAAGTCAGTGAATCATTTCCTTTCAAATGGATAAACAAGAAGTGGAAAGAAGGATTCCATGTAACATCCATGACTACTGCTGGCATTCGATGGGGTGTTGTTATGTCCAGGAATGCCGGGTATTCTGATCAGGTTGTGGAGTTAGACTTTTTGTATCCTAGTGAAGGAATCCATCGACGATGGGAGAGTGGTTACCGGATTACATCTATGGCTGCTACTACTGATCAGGCAGCATTCATACTGAGCATTCCGAAACGTAAATTACTTGATGAAACTCAAGAGACTCTGAGGACATCTGCCTTCCCTAGCACCCATGTAAAGGAAAAATGGTCCAAGAATCTATATATTGCCTCAATATGTTATGGGCGAACTGTTTGCTAG 2172 0.4452 MPELRSGARRSKRLGDLQPGSLPVGQGENWVQPPAQNRTRRRVGGGRGRGGNATAVGKGPSPAVPTRRTAAGRGRRTRVIDLDPEPCDVLPEPVALGALEPIYNQVEVVANNNIVMEGGSGDKVVAAEEETSTTPVPERVQVGGSPVYKIERKLGKGGFGQVYVGRRISGGSDQTGPDAIEVALKFEHRNSKGCNYGPPFEWQVYTTLNGCYGIPRVHYKGRQGDFYILVMDILGPSLWDVWNSLGQSMSPNMVACIAVEAISILEKLHLKGFVHGDVKPENFLLGQPGTADDKKLYLIDLGLASRWKDASSGQHVDYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMGTTPELMCCFCPAPFKQFLEVVTNMGFDEEPNYHKLISLFDSLIEPCTPLRPIRIDGALKVGQKRGRMLINLEEDEQPKKKVRLGSPATQWISVYNARRPMKQRYHYNVSDTRLRQHVDKGIEDGLYISCVASSANLWALIMDAGTGFSSQVYELSAAFLHKDWIMEQWEKNYYISSIAGAVNGSSLVVMSKGLLFVSHDRNHCFIGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGIRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWESGYRITSMAATTDQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWSKNLYIASICYGRTVC 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0425 723 PANTHER BNAA05G37270D PROTEIN 104 697 - -
Lal10g0425 723 SMART serkin_6 148 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0425 723 Gene3D Transferase(Phosphotransferase) domain 1 118 465 - -
Lal10g0425 723 MobiDBLite consensus disorder prediction 1 75 - -
Lal10g0425 723 ProSiteProfiles Protein kinase domain profile. 148 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0425 723 SUPERFAMILY Protein kinase-like (PK-like) 148 435 IPR011009 -
Lal10g0425 723 ProSitePatterns Protein kinases ATP-binding region signature. 154 185 IPR017441 GO:0005524
Lal10g0425 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Lal10g0425 723 PANTHER CASEIN KINASE-RELATED 104 697 - -
Lal10g0425 723 Pfam Protein kinase domain 148 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0425 723 CDD STKc_CK1 148 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0425 Lal-Chr10 10350965 10358146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0425 126 380 AGC Kinase Gene Family AT3G08720 22.868 4.59e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Lal10g0425 Pkinase 1.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0425 - - gmx:100801967 1339.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1033 8 8169654 8176484 Lal10g0425 10 10350965 10358146 LSH