Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0409 ATGAAAAGAGTTCTTGAATTTTACAAAGGTTTTGAGCACATTAATAAATTGGTAGATGTTGGTGATGGTCTTGGGATAAATCTCAATCTCATTACTTCCAAATATCCTCATCTCCATGGTATTAATTTTGACTTGCCTCATGTTATAGAACATGCCCCTACCTATGCTGGCGTGGAACACGTTGGAGGAGATATGTTTAAGAGTGTTCCTCGTGAAGATGCCATTTTTATGAAGGCATGA 240 0.375 MKRVLEFYKGFEHINKLVDVGDGLGINLNLITSKYPHLHGINFDLPHVIEHAPTYAGVEHVGGDMFKSVPREDAIFMKA 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0409 79 Pfam O-methyltransferase domain 1 78 IPR001077 GO:0008171
Lal10g0409 79 Gene3D Vaccinia Virus protein VP39 1 79 IPR029063 -
Lal10g0409 79 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 78 - -
Lal10g0409 79 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 79 IPR016461 GO:0008168
Lal10g0409 79 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 78 IPR029063 -
Lal10g0409 79 PANTHER O-METHYLTRANSFERASE 1 78 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0409 Lal-Chr10 10048581 10048990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0409 1 78 Monolignol Biosynthesis Gene Families AT5G54160 69.231 3.17e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0409 K13066 - gmx:100789402 143.28