Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0390 ATGGGAACCCCACAGTCCAATTTGCCACCAGGTTTTAGGTTCCACCCAACTGATGAGGAACTCATTCATCACTATCTCGTCAAGAAGGTAGCCTCCATCCCCTTGCCAGTTACTATCATTGCCGAGGTTGATATCTATAAGTTGGATCCATGGGATTTACCAGCAAAGGCTGCATTTGGGGAGAAAGAATGGTATTTTTTCAGTCCAAGAGACCGCAAGTACCCTAATGGTGCTAGACCTAACAGGGCAGCTGCTTCAGGATATTGGAAGGCCACTGGCACAGATAAGACTATAGTGACATCATTGGCAGGAGAAGGACGAGAGAACATTGGTGTGAAGAAGGCTCTTGTATTTTACGAAGGAAGGCCCCCAAAGGGTGTCAAGACCAATTGGATTATGCATGAATATCGTCTTCTTCACAACAACGGACCTAATAATAAGGTCAAAGACACCTCCATGAGGTTAGATGACTGGGTTTTGTGCCGGATATACAAGAAAGCTAAATACACAGTATCTGCAACAAAAGTGGTAGGTGATGAAGATAATTCAGAAGAGAAACTATTCAAAGATACCCTTTTACCAATCTCTCATAAAAATTCAAATTCTCCACAGAACACACTAATATCTCAGAAATCTGTATCCTTTTCCAACCTATTGGATGCCATGGACTACTCCATTCTAAGAAGCTTCTTATCTGAGACAGAGAACCATTCCAATAACCCACCAGGATCAAGTGTGGGCTTCAACAGTGGGAATAGCATGGATCAACAAACTTTTCAAATCAACACCAACATCAATGGCCACATGTTTCATATGAATCCTTCAGTCCCAAACATGGAAAATATAATAAAGCCCAAGCGCCAGCATTCATCAAATATAGATGAGGATATGCAGTTATATCCTTCAAAGAAATACCTTAGTTCTTCTTGCAATTTGCCTAACACTAATGCCCAATATCATCAGAGCTACCTCATGAACCAGTCTTTATTGAATCAGCATTTACTTTTGGGCCCTCATCCTCGATTTCAGGGATAA 1035 0.4145 MGTPQSNLPPGFRFHPTDEELIHHYLVKKVASIPLPVTIIAEVDIYKLDPWDLPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVTSLAGEGRENIGVKKALVFYEGRPPKGVKTNWIMHEYRLLHNNGPNNKVKDTSMRLDDWVLCRIYKKAKYTVSATKVVGDEDNSEEKLFKDTLLPISHKNSNSPQNTLISQKSVSFSNLLDAMDYSILRSFLSETENHSNNPPGSSVGFNSGNSMDQQTFQINTNINGHMFHMNPSVPNMENIIKPKRQHSSNIDEDMQLYPSKKYLSSSCNLPNTNAQYHQSYLMNQSLLNQHLLLGPHPRFQG 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0390 344 MobiDBLite consensus disorder prediction 234 253 - -
Lal10g0390 344 Pfam No apical meristem (NAM) protein 9 138 IPR003441 GO:0003677|GO:0006355
Lal10g0390 344 PANTHER OS01G0104200 PROTEIN 5 291 - -
Lal10g0390 344 PANTHER NAC TRANSCRIPTION FACTOR 56 5 291 - -
Lal10g0390 344 ProSiteProfiles NAC domain profile. 8 166 IPR003441 GO:0003677|GO:0006355
Lal10g0390 344 SUPERFAMILY NAC domain 4 166 IPR036093 GO:0003677|GO:0006355
Lal10g0390 344 Gene3D NAC domain 17 171 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0390 Lal-Chr10 9628335 9631935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0390 4 344 NAC Transcription Factor Family AT3G04070 49.721 7.02e-102 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal10g0390 NAM 6.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0390 - - gmx:100301906 501.516