Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0317 ATGCAAGACTCTTTGAATTTCCATGAAGTGGTCCAGCCAATTGAAAGAGAAATTCGGCCATCCTTTAATGCCTTGGTCCCCACAAACTTAGGGATAAGGAAAGAACAGAGGTTCTTGGCTGGGGCTACGCCGAAAGAAAGGGACTTGAAATCTTCCAACATCTTGCAAGATAATGAATATAATGCAAAACTATCTGATTATGGATTAGCCAAACTTGCAGGTAAAGATAAGATGAATATTGTGCCTACAAGGTTTATGGGTACCTATGGGTAG 273 0.4066 MQDSLNFHEVVQPIEREIRPSFNALVPTNLGIRKEQRFLAGATPKERDLKSSNILQDNEYNAKLSDYGLAKLAGKDKMNIVPTRFMGTYG 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0317 90 Gene3D Transferase(Phosphotransferase) domain 1 47 90 - -
Lal10g0317 90 ProSiteProfiles Protein kinase domain profile. 1 90 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0317 90 PANTHER RECEPTOR KINASE-LIKE PROTEIN 47 90 - -
Lal10g0317 90 PANTHER OS07G0668900 PROTEIN 47 90 - -
Lal10g0317 90 SUPERFAMILY Protein kinase-like (PK-like) 47 89 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0317 Lal-Chr10 6572788 6578736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0317 47 90 Glycoside Hydrolase AT3G07070 61.364 3.21e-11 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lal10g0317 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0317 - - ahf:112759084 82.0333