Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0250 ATGCCTGCATCTAAGACTTCATCATTTTATGGTGAAAGCCAAACCGTGTGTGTCACTGGGGCCAGTGGGTTCATTGCTTCTTGGATTGTCAAATTTCTGTTGCAGAAAGGCTACACTGTTAGAGGCACACTGCGGAACCCAGATGATCCGAAGAATGGGCACTTGAAAGAGATGGAAGGAGGGAAGCATAGACTAACACTGCATAAAGTTAATCTCCTTGATATTCAATCTGTTAAAGCTGTTTTTCGTGGTTGTGATGCTGTCTTTCACACTGCCTCTCCTATCACTGATAACCCTGAAGAGATGTTAGTGCCATCAGTGAATGGAAGCAAGAATGTAATAATGGCAGCTGCGGAAGCAAAAGTGCGGCGCGTGGTATTCACTTCATCAATAGGTGCTGTGTATATGGACCCCACCAGGAATAGAGATTTGGTGGTTGATGAGTCATGTTGGAGTGATTTGGATTACTGCAAGAACACCAAGAATTGGTATTGCTATGGGAAGGTCGTAGCTGAACAAACAGCATGGGATATAGCTAAAGAGAAAGGTGTGGATTTGGTTGTGGTGAACCCAGTTTTGGTTATTGGACCATTACTTCAAACCAACATCAATGCTAGCACAATTCATATCTCCAAGTATCTCACTGGCTCTGCCAAGACTTATGTTAATGCTACTCAGTCTTATGTTCATGTTAAGGATGTTGCATTTGCACACATTCTTGTTTATGAGACACCTTCTTCTTCAGGAAGATACATATGTTCTGAAAGTTCATTGCACCGTGGTGAGCTAGTTGAAATTCTAGCTGAGTTTTTCCCTGATTACCCAATTCCTACCAAGTGTTCAGATGAAAAGAACCCAAGGGTAAAACCCTACATCTTTTCAAATAAAAAATTAAAAGATTTGGGGTTGGAGTTCACCCCAGTGAAGCAGTCTCTATATGAAACTGTTAGGAGCTTACAAGAGAAAGGACACATTCCGGTCCCTATGAAAGGGCAAGAAGACTGTGAAAGTTGA 1014 0.4201 MPASKTSSFYGESQTVCVTGASGFIASWIVKFLLQKGYTVRGTLRNPDDPKNGHLKEMEGGKHRLTLHKVNLLDIQSVKAVFRGCDAVFHTASPITDNPEEMLVPSVNGSKNVIMAAAEAKVRRVVFTSSIGAVYMDPTRNRDLVVDESCWSDLDYCKNTKNWYCYGKVVAEQTAWDIAKEKGVDLVVVNPVLVIGPLLQTNINASTIHISKYLTGSAKTYVNATQSYVHVKDVAFAHILVYETPSSSGRYICSESSLHRGELVEILAEFFPDYPIPTKCSDEKNPRVKPYIFSNKKLKDLGLEFTPVKQSLYETVRSLQEKGHIPVPMKGQEDCES 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0250 337 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 329 - -
Lal10g0250 337 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 320 IPR036291 -
Lal10g0250 337 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 9 329 - -
Lal10g0250 337 CDD FR_SDR_e 16 303 - -
Lal10g0250 337 Gene3D - 7 336 - -
Lal10g0250 337 Pfam NAD dependent epimerase/dehydratase family 16 247 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0250 Lal-Chr10 3599734 3605602 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0250 12 279 Monolignol Biosynthesis Gene Families AT1G80820 70.149 3.26e-138 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0250 K09753 - gmx:100796771 548.895