Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0201 ATGGTTTCCATGAGCGAGAGAAGTTCGGAAAATGTAGCGAATGAGAACTTGACAGAGACTAAGCCAATGCAGCGAAGAACCAGTGCTCGAATCCAAGCTGTTAAGGAAAAATCATCTCGTCAAAAAGCAGAGGCTATAGCAGAGAGAGACGAAGGGAAAACCAGTGGTTCAGCCGCGGCGGAGAAGCCGAAAAGGCGATATAATAAAAGGAGTCGCAAAGAGGAGAGTGTGGCTGTGGTTGAGGGTAACAACACTGTTTTGGAGGTAAAGAATGAGACTGTGGGTGATGGAGATGTTATTTCGGAGCAGCCGAAGAAGCCGAAAGGAAATGCGAAGTGTGAGGCCATGATGAAGATTAAAGGTGAAAGAGAAAATAAGATCGATTTTGAAAATGCGGCTGATGTTATTAAGCCAGAGAAAACTGATTCCTTAAAGGTGAAAGAGACTATTAGATTGTTCACTAAACACTATCTTCATTTTGTTCAGGAAGAGGAGAAGAGGTGTGCAAAAGCAGAGGCAGACCGGAAAGCTGCCAAAGCTGCTAAAAAAGCTTCAAAATCAAATATGATTCAAAATAATGAGATATTGAACCCTGAGAAAAGAGTTGGCACCATTTCAGGTATTGAGGTTGGACATCAGTTCTATTCTCGTGCTGAAATGGTTGTTGTTGGTTTTCATAGCCATTGGTTAAATGGCATTGATTTTATGGGCCAATCCTATGCCAAAGTGCACAAAAACTATGAATACCCAATTGCTATAGCCATTGTGTTGTCTGGCATGTACGAAGATGATCTTGATAATGCTGAGGATGTTGTGTATACTGGTCAAGGTGGGCATAATCTGGTTGGTGATAAGCGCCAAATTCGAGATCAAAAATTGGAGCGTGGTAATCTAGCACTCAAGAATTGTGTGGAGCAATGTGTTCCTGTTAGGGTGGTACGTGGTCATGAATCTTCAAGCAGTTACACTGGTAAAATCTACACATATGATGGCTTGTACAAGGTTGTCAATTATTGGGCAGAGAAGGGAATATCTGGATTTACAGTGTATAAATTTCGACTTAGGAGGCTTGAAGGGCAGCCTTTATTAACCACAAATCAGGTTTATTTCACTTGTGGACGTGTACCTCAGTCTGTTGCGGAAATACGAGGATTGGTATGTGAGGATATCACTACAGGCCAAGAAGATATGCCCATTCCTGCAACGAACTTGGTTGATGATCCCCCTGTTCCACCCACAGGTTTTACATATTTTAAGTCCGTTAAGGTTGCAAAAAACGTGAAGCTTCCTATGGATGCCACTGGATGTAAATGCAAAGACAAATGTGTTGATCCTACTACTTGTGAATGTGCTTTGCGTAATGGGTCTGATTTTCCTTATGTATCACGGGATGGTGGCAGGTTAATTGAAGCAAAAGATGTTGTCTTTGAATGTGGTCCAAATTGTGGATGTGGTCCTGGTTGTGTGAACCGAACTTCTCAAAGAGGGCTTAGATATCGATTGGAGGTTTTCCGCACTGCAAAGAAAGGATGGGCTGTTAGATCTTGGGATTTTATACCTTCTGGAGCACCAGTGTGTGAGTATACAGGAATACTTTCTAGGGCAGAAGATATGGAAACAGTATTGGAAAACAATTATATATTTGAGATTGATTGTTTGCAAACAATCAAAGGGATCGGTGGACGAGAGAAGCGGTCCACAAATGTAGCATTTCTTGAAAATCTTTTGGACAAATCTGATGAGCAAGGTTCTGAAAATGTGCCCGAGTATTGTCTTGATGCAGGATCAACTGGAAATATTGCTCGGTTTATAAACCATTGTTGTGAGCCTAATTTGTTTGTTCAATGTGTTTTGAGCACACACCATGACCTGAAATTTGCTCGAGTTATGCTGTTCGCCGCTGACAACATACCTCCTATGCAGGAGTTGACTTATGACTATGGTTATGCACTTGATAGTGTCTTGGGTTCTGATGGGAAGATTAAGCAAATGCCTTGCTATTGTGGAGCCACTGGCTGTAGGAAGAGATTATTCTAA 2037 0.4173 MVSMSERSSENVANENLTETKPMQRRTSARIQAVKEKSSRQKAEAIAERDEGKTSGSAAAEKPKRRYNKRSRKEESVAVVEGNNTVLEVKNETVGDGDVISEQPKKPKGNAKCEAMMKIKGERENKIDFENAADVIKPEKTDSLKVKETIRLFTKHYLHFVQEEEKRCAKAEADRKAAKAAKKASKSNMIQNNEILNPEKRVGTISGIEVGHQFYSRAEMVVVGFHSHWLNGIDFMGQSYAKVHKNYEYPIAIAIVLSGMYEDDLDNAEDVVYTGQGGHNLVGDKRQIRDQKLERGNLALKNCVEQCVPVRVVRGHESSSSYTGKIYTYDGLYKVVNYWAEKGISGFTVYKFRLRRLEGQPLLTTNQVYFTCGRVPQSVAEIRGLVCEDITTGQEDMPIPATNLVDDPPVPPTGFTYFKSVKVAKNVKLPMDATGCKCKDKCVDPTTCECALRNGSDFPYVSRDGGRLIEAKDVVFECGPNCGCGPGCVNRTSQRGLRYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGILSRAEDMETVLENNYIFEIDCLQTIKGIGGREKRSTNVAFLENLLDKSDEQGSENVPEYCLDAGSTGNIARFINHCCEPNLFVQCVLSTHHDLKFARVMLFAADNIPPMQELTYDYGYALDSVLGSDGKIKQMPCYCGATGCRKRLF 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0201 678 SMART PostSET_3 662 678 IPR003616 -
Lal10g0201 678 SMART G9a_1 198 360 IPR003105 -
Lal10g0201 678 Gene3D SET domain 380 678 IPR046341 -
Lal10g0201 678 SMART preset_2 387 483 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lal10g0201 678 MobiDBLite consensus disorder prediction 1 27 - -
Lal10g0201 678 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 24 677 - -
Lal10g0201 678 Coils Coil 161 181 - -
Lal10g0201 678 MobiDBLite consensus disorder prediction 1 76 - -
Lal10g0201 678 MobiDBLite consensus disorder prediction 30 76 - -
Lal10g0201 678 Pfam SET domain 510 648 IPR001214 GO:0005515
Lal10g0201 678 ProSiteProfiles Pre-SET domain profile. 434 496 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lal10g0201 678 SUPERFAMILY SET domain 384 654 IPR046341 -
Lal10g0201 678 Gene3D - 184 372 IPR036987 -
Lal10g0201 678 ProSiteProfiles SET domain profile. 499 648 IPR001214 GO:0005515
Lal10g0201 678 SUPERFAMILY PUA domain-like 189 375 IPR015947 -
Lal10g0201 678 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 23 678 IPR025794 GO:0016571
Lal10g0201 678 SMART set_7 499 654 IPR001214 GO:0005515
Lal10g0201 678 Pfam SAD/SRA domain 202 360 IPR003105 -
Lal10g0201 678 ProSiteProfiles YDG domain profile. 203 356 IPR003105 -
Lal10g0201 678 ProSiteProfiles Post-SET domain profile. 662 678 IPR003616 -
Lal10g0201 678 Pfam Pre-SET motif 390 491 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lal10g0201 678 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 24 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0201 Lal-Chr10 2672422 2694884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0201 189 678 EF-hand Containing Proteins AT5G13960 65.244 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal10g0201 SAD_SRA 2.3e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0201 K11420 - gmx:100796701 938.717