Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0185 ATGACATCTCAAGACAGTGAAAATTGGCCAATAGAATTTGTTAGAGATTTTGATGTACCATCTAATGACCATGATATTGAAGAACTACAAAGAGATCATTTGGGTCATGCCGAAAAAACCAATGACTCAACTCCTTACAATGGACAAATATTTAACTCTGAAGAAAATGCATACATTTTTTACTATTTATTTGCAAAGAGATGTGGTTTTTCTGTTAGAAGAGGTCACACTTATAAACGTAATGATTCAGATAACATTGAGTATATTTACAGAAGAGAGTTCATTTGTCATCGAGCTGGTATTGTTAACCAACAAAAAATTATTGAACCAGAAAAACAAAGGAAATGGAAAAGTTCAAGATGCAATTGTAGTGCAAAATTGTTTATTAGTAAAAGACCAATTAACTGGGAAGAACGTTGGGTGGTTACATATTTTAGTAATTCTCATAACCATGCATTATTGGATGATAAAGAAGTTCGGTTTCTTCCTGCTTATCGTGACATACCTAACAATGATCAAAGTCGTATATTACTGTTATCTAAAGCTGGTTGCTCAATAAGTATTATAATGAGAGTGCTTGAATTGGAGAAAGGAATAGAGGCAGGCCATTTGCCATATTTGGAGAAAGATATAAGAAATTTTTTACAATCTGAAAGTAGTGTTGGTAATGAAAATGATGCTTCAGACGTTCTCAAATTATGCAAAAAATTGAAAGATATAGACGATGCCTTTCAATATGATTTCACCATGGATGAAAGTAACAAATTGGAGCATATTATTTGGGTATTCGGTGATTCAATTCGAGCATATGAAGCTTTCGGAGATGTGGTTGTCTTTGATACTACATATCGAATAAATCGTTATGATATGCCTCTTGGACTATGGGTCGGGGTTGATAATCATGGTAATTCAATTTTCTTTGGATGTGTTCTATTGCGAGATGAGAAGATACCTTCTTTCAGATGGACATTAAAGACGTTTTTACACTTTGTCAAGGGAAAATACCCAAGAACAATTCTCACGGATCAAGACCATGCACTTAAAGAAGCTATTTCAACAGAATTGTCAAACACAAAACATGCATTTTGCATATGGCACATTGTATCAAAGTTCCCAATTTGGTTTTCTTTCTCTTTGGGCCCAAAATATGACGACTTCAAATCCGAATTCTATAGGCTATACAATTTAGAATATGTAAGTGATTTTGAGCAACAATGGGAAATAATGGTTTACAACCTTGATCTAAGTAAAGATCATCATATTGTCTCATTGTATTCTCATCGCCAATTTTGGGCATTGACATATTTGAAGGATTATTTTTTCGCTGGAATGACGACAACTGGACGTTCGGAATCTATAAATTCATATATTAAAAAATTCCTGCATGTCAGAACGAGTTTGGTGGACTTTGTAAATCAAGTTGGAGTTGCCGTCACTATTAGAAATCAAGCTGGAGAAGAGGCAAGAATGCGTCAAAAGTATCATAATCCTCAAATTAGAACAAGTTTTCCCATCGAGGAACATGCTTCAAATATACTCACACCTTATGCCTTTGAGTTACTCCAACATGAAATTGAGTTATCTTCAAAATATGCAGCAACTAAAATTGACAATAACTCTTACATAGTGCGACATCATACCAAGCTTAATGGAGGTCGGTTGGTAAGTCTAATAAAAGAGAAAGATGAAGAATCAATTCGTTGTTCTTGTAGAGAATTTGAATTTTGTGGGATATTGTATAGACATGCTATTCGAGTGTTGTTGAAGAATGACTATTTTTGCCTCCCAGAAAAATATCTTCCTTCTCGATGGAGACGAAAGAGTTCATTGATCCCAAAATCTAGTCACATAACTATCTGCAATGATAACTCATCCATTGAGTTTCAGTCTATGGTGCAATGCCTAGAAGTTGAAACTTTGAAGACAAAAGATCGAGTTGTAGTAACTACTAAAGAATTAGAGCGAGTCATTGAGTTGGTAAAAAACATGTCTGTTGTTCCAAAACAATCAATTGATTTGGAAAATGATGTTAGAGATGATGTTGATGATTGCGATGTTGATGATTTCGAAGACAAAAGGTCGTCCAAAAGGATCAAGACCAAAAGGGGAGTTGAAGTTGCAAAAAAGTCACGTCGTTGTCACTTTCCTAATTGTGGTGGAACGAATCATGACTCAAGAAATTGTCCAAACAAAAGGAAAAAATACTCATTGTTGAATTCTCAATCTCCTAATAAGTAA 2238 0.3436 MTSQDSENWPIEFVRDFDVPSNDHDIEELQRDHLGHAEKTNDSTPYNGQIFNSEENAYIFYYLFAKRCGFSVRRGHTYKRNDSDNIEYIYRREFICHRAGIVNQQKIIEPEKQRKWKSSRCNCSAKLFISKRPINWEERWVVTYFSNSHNHALLDDKEVRFLPAYRDIPNNDQSRILLLSKAGCSISIIMRVLELEKGIEAGHLPYLEKDIRNFLQSESSVGNENDASDVLKLCKKLKDIDDAFQYDFTMDESNKLEHIIWVFGDSIRAYEAFGDVVVFDTTYRINRYDMPLGLWVGVDNHGNSIFFGCVLLRDEKIPSFRWTLKTFLHFVKGKYPRTILTDQDHALKEAISTELSNTKHAFCIWHIVSKFPIWFSFSLGPKYDDFKSEFYRLYNLEYVSDFEQQWEIMVYNLDLSKDHHIVSLYSHRQFWALTYLKDYFFAGMTTTGRSESINSYIKKFLHVRTSLVDFVNQVGVAVTIRNQAGEEARMRQKYHNPQIRTSFPIEEHASNILTPYAFELLQHEIELSSKYAATKIDNNSYIVRHHTKLNGGRLVSLIKEKDEESIRCSCREFEFCGILYRHAIRVLLKNDYFCLPEKYLPSRWRRKSSLIPKSSHITICNDNSSIEFQSMVQCLEVETLKTKDRVVVTTKELERVIELVKNMSVVPKQSIDLENDVRDDVDDCDVDDFEDKRSSKRIKTKRGVEVAKKSRRCHFPNCGGTNHDSRNCPNKRKKYSLLNSQSPNK 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0185 745 Pfam FAR1 DNA-binding domain 60 154 IPR004330 -
Lal10g0185 745 MobiDBLite consensus disorder prediction 716 745 - -
Lal10g0185 745 SMART 26again6 566 593 IPR006564 GO:0008270
Lal10g0185 745 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 25 670 IPR031052 GO:0006355
Lal10g0185 745 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 25 670 - -
Lal10g0185 745 ProSiteProfiles Zinc finger SWIM-type profile. 553 591 IPR007527 GO:0008270
Lal10g0185 745 Pfam MULE transposase domain 276 369 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0185 Lal-Chr10 2295886 2298292 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal10g0185 FAR1 1.6e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0185 - - var:108339217 926.391