Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0178 ATGTCAAACCCTTCATCCATTTCTGATTCCAAACAAGGTTCAACAAAAAGACCAAAACCACAATCTTCTAAAAGAATCTTCCAATGCCATTTTTGCCATAGAAGGTTCTTCACTTCTCAAGCTCTTGGTGGCCACCAAAATGCTCATAAGCTTGAAAGAGCAGCTTCTAGAAGAACCACAAAAAACTTCTCATTCACTCAAAATGTTACCTCACCACCACCGCCGCCGCCGCCACCGCCACCACCACCATTTGCAGCTTCTCATGCTTGTTTCATTGATCACTCGCCTTACTTGTTTCAAATGCAGACACATCAACATGTTGTAACAAGCACCAATGTTCTTCCTATTTCCTTTAATGATTGTTCTTTACAAAAATGA 378 0.4101 MSNPSSISDSKQGSTKRPKPQSSKRIFQCHFCHRRFFTSQALGGHQNAHKLERAASRRTTKNFSFTQNVTSPPPPPPPPPPPPFAASHACFIDHSPYLFQMQTHQHVVTSTNVLPISFNDCSLQK 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0178 125 MobiDBLite consensus disorder prediction 1 24 - -
Lal10g0178 125 ProSitePatterns Zinc finger C2H2 type domain signature. 29 49 IPR013087 -
Lal10g0178 125 PANTHER OS02G0182300 PROTEIN 14 87 - -
Lal10g0178 125 SUPERFAMILY beta-beta-alpha zinc fingers 24 54 IPR036236 -
Lal10g0178 125 PANTHER ZINC FINGER PROTEIN JAGGED 14 87 IPR045320 GO:0003700
Lal10g0178 125 ProSiteProfiles Zinc finger C2H2 type domain profile. 27 54 IPR013087 -
Lal10g0178 125 MobiDBLite consensus disorder prediction 1 22 - -
Lal10g0178 125 Gene3D Classic Zinc Finger 5 71 - -
Lal10g0178 125 MobiDBLite consensus disorder prediction 69 86 - -
Lal10g0178 125 MobiDBLite consensus disorder prediction 43 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0178 Lal-Chr10 2117896 2118273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0178 25 93 C2H2 Transcription Factor Family AT5G57520 39.130 2.65e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0178 - - lang:109330395 98.9821