Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0169 ATGTGTGAGGAAAACCAGGTTAAGGAACTTGAGATGGAAAACTCATATGAAAATGGTTTCCAACTTAGTGTAAAACTAAGGGAACAAAACCTAGTTCCTCCTGAAGAAGAAACAAAAAAAGGTATATATTTCCTTTCTAACCTAGACCAGAACATTGCAGTGAATGTAAGAACTGTTTACTGCTTCAAATCAAAAGAGAATAAAGGAAATGAGAATGCTGGAGAAGTGATGAAGAATGCATTGAGGAAGGTTCTAGTTCATTATTATCCACTTGCTGGGAGATTGAACATAAGCTCAGAGGGTAAACTCATAGTTGATTGCACTGGTGAAGGTGCTATGTTTGTAGAAGCTGAAGCAAATTGTTCAATGGAGGAGATTGGTGATATCACAAAGCCAGATCCAAGGACTCTTGGTAAACTGGTTTATGACATTCCTGATGCAAAACACATACTTCAAATGCCTCCTTTGGTTGCTCAGGTAACCAAGTTTCAATGTGGAGGCTTTTCTCTTGGGCTGTGCATGAATCACTGTATGTTTGATGGCATTGGTGCTATGGAGTTTGTGAACTCTTGGGGTGAAGAAGCTAGAGGATTACCACTCTCTAACCCTCCATTTCTTGATAGAACCATACTCAAGGCACGTAATCCACCAAAGTTAGAGTTTCTGCACCAAGAATTTGCAGACATTGAAGACAAGTCCAACACTAATAGTTTGTATGAAGATGAAATGGTCTACAAGTCCTTCTTTTTTGATCCTGAGAAGCTAAATCAGCTTAAGGAAAAAGCTAAGGAAAATGGGGTTCTTGAATCTTGCACAACTTTTGAAGTCCTTTCAGCTTTTGTATGGATAGCAAGAACAAAAGCACTTAAAATGTTGCCTGATCAAGAAACAAAACTGCTTTTTGCTGTTGATGGAAGAGCTAAGTTTAACCCTAATCTTCCAAAAGGGTACTTTGGGAATGGGATTGTGTTGACAAATTCATTATGTAATGCAGGTGAATTGACTAAAAAGCCCTTCTCATTTGCTGTGAGGCTTATTCAAGATGCTATCAAAATGGTCACTAACAATTATATGAGATCAGCTATAGATTATTTTGAAGTGACAAAAGCTAGGCCTTCTTTATCTTGCACCCTTTTGATCACAACTTGGTCAAAATTGTCTTTTCATACCACTGATTTTGGATGGGGAGAACCTATTCTTTCAGGGCCAGTTTCATTGCCTGAGAAAGAAGTGATTTTGTTCCTTTCTCATGGCAAAGAGAGAAGAAACATTAATGTGCTTTTGGGTTTGCCAGATCCTGCTATGAAGATCTTCCAAGACTTGATGCAGATATAG 1335 0.3828 MCEENQVKELEMENSYENGFQLSVKLREQNLVPPEEETKKGIYFLSNLDQNIAVNVRTVYCFKSKENKGNENAGEVMKNALRKVLVHYYPLAGRLNISSEGKLIVDCTGEGAMFVEAEANCSMEEIGDITKPDPRTLGKLVYDIPDAKHILQMPPLVAQVTKFQCGGFSLGLCMNHCMFDGIGAMEFVNSWGEEARGLPLSNPPFLDRTILKARNPPKLEFLHQEFADIEDKSNTNSLYEDEMVYKSFFFDPEKLNQLKEKAKENGVLESCTTFEVLSAFVWIARTKALKMLPDQETKLLFAVDGRAKFNPNLPKGYFGNGIVLTNSLCNAGELTKKPFSFAVRLIQDAIKMVTNNYMRSAIDYFEVTKARPSLSCTLLITTWSKLSFHTTDFGWGEPILSGPVSLPEKEVILFLSHGKERRNINVLLGLPDPAMKIFQDLMQI 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0169 444 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 25 443 - -
Lal10g0169 444 Gene3D - 227 443 IPR023213 -
Lal10g0169 444 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 443 - -
Lal10g0169 444 Pfam Transferase family 23 441 - -
Lal10g0169 444 Gene3D - 19 226 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0169 Lal-Chr10 1954764 1957864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0169 22 442 Monolignol Biosynthesis Gene Families AT5G48930 35.092 1.09e-85 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0169 K15400 - gmx:100804504 757.673