Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0162 ATGGATCCCAAGGGTTCAAAGCAGCCACAAGAACAAGGAAACAACAACAATATGGGAGAGAACAATAAAACAGAAGAAGGAGTGAAGGATTTTCAGATTATGATTTCTGACAAAGAAGATAGCAGCAAGAAACAGTTAGCACCAAAGAGAATTTCAAACAAAGACAGACACACAAAAGTTGAAGGAAGAGGAAGAAGGATAAGAATGCCAGCTTTATGTGCAGCTAGGATCTTTCAGTTAACAAGAGAATTAGGTCATAAATCTGATGGAGAAACAATTCAATGGTTACTTCAACAAGCTGAACCATCTATAATAGCAGCTACTGGTACTGGAACAATACCAGCTTCTGCTTTAGCTTCTGCTAGTAACTCAGTTTCACAACAAGGAACTTCTCTATCTTCTGGGTTGCACCAAAAATTTGATGAGTTTATTGGGTCAGGAAGTAGGGCAAATTGGGTTGGTGGGAATTTAGTGAGACCCTATGTGGCCACAACAGGTTTATGGCCACCCCATGTAAGTGTTTTTGGGTTTCAATCATCACCTAGTTTAGGGACTGAAGGTTCAAGTTACCTTCAGAAAATTGGGTTCCCAGGGTTTGACTTTCATGGTGCACCAAACAACATGGGTCCTATGAGTTTCACTTCAATTTTGGGTGGTGGGGCTAACCAGAATATGCCTGGTTTGGAGCTTGGTTTGTCTCAAGATGGCCATATTGGGGTCTTGAATCCACAGGCCTTGAGCCAGATTTATCAGCAGGTGGGTCAGCAAGGTAGAGTTCAACAGCATCAGCAGCAGCACCATCAGGCTCCTACTACTGAGGATGATTCACAAGGTTCAGAACAGTGGAATTGCATGGTAAAAAATAGCTTGGTTTCTTGGACATGTGGCCTTAAAACTGTTGTATATTTCAGAGATAACTTAGCTGAAGATGTCACAGGAATAGCGAAGAGGGTGTTTCTGGATATTACATAA 972 0.4167 MDPKGSKQPQEQGNNNNMGENNKTEEGVKDFQIMISDKEDSSKKQLAPKRISNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALASASNSVSQQGTSLSSGLHQKFDEFIGSGSRANWVGGNLVRPYVATTGLWPPHVSVFGFQSSPSLGTEGSSYLQKIGFPGFDFHGAPNNMGPMSFTSILGGGANQNMPGLELGLSQDGHIGVLNPQALSQIYQQVGQQGRVQQHQQQHHQAPTTEDDSQGSEQWNCMVKNSLVSWTCGLKTVVYFRDNLAEDVTGIAKRVFLDIT 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0162 323 ProSiteProfiles TCP domain profile. 53 107 IPR017887 -
Lal10g0162 323 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 280 IPR005333 GO:0003700
Lal10g0162 323 MobiDBLite consensus disorder prediction 7 22 - -
Lal10g0162 323 MobiDBLite consensus disorder prediction 23 65 - -
Lal10g0162 323 Pfam TCP family transcription factor 52 142 IPR017887 -
Lal10g0162 323 MobiDBLite consensus disorder prediction 1 65 - -
Lal10g0162 323 MobiDBLite consensus disorder prediction 252 280 - -
Lal10g0162 323 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 1 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0162 Lal-Chr10 1880222 1883255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0162 20 250 TCP Transcription Factor Family AT3G27010 63.008 2.87e-79 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal10g0162 TCP 1.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0162 - - lang:109344348 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0162 10 1880222 1883255 Lal10g0162 10 1880222 1883255 ECH