Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0140 ATGAAGCCTAATAGCCCCACATTTGAAAAACTTGGCGGGAAAGAAAACACTATGAAAGAAAGGCATAAAAAACCACACCCAAATTCTTCATCTTCATCTTCATTTTCTTCTCCAATGGAAGAACCAAAAGAAAAGTGTTGGAGGCAAGAAGTGGATGAGAATCTTCACCGTCTCCACTCTCTCCACTTTGGCGCTGAACTCGCTCTCGATAACAATGATTTCCATTCCGCTCATATCTTCTCCCTCCGCCTCCTTGGCTTTCTCGATTCTCACACCGTCTCCGCCGTCGATCAAACCTTCGTTCATCCTATTCGCCGTCAAGTTCTCTCCAATGTTCACTCTCTTCGTAGATCTCTCGTTCCTGATTCCGATCGGCGTGCTTTTGAACAAGCAAAGAAATCTCCTGGACTCGTTTTTGGCGCAACTGGAGATATTGACATTGATAAGATTCGCAAGTCGAAATTCTTTCAAGCTCTTAATGAAAATGTTGACAATCAATTGGGTGATCAGCAGGGGAAGCAACACAAGACATGCGACAAGGCATCAAAGGAAAGGGTGCAAGCAAAATTGACAACCATTTATGAGAAAAGCATCTTCAAAACTAACAGCTCTGAGGACTGCATGGTTGTTGAAAGGCCTCAATCAAGTACCAAAGGTCGTGCTTTCTTTTCTTTTGATGAGGAAGAAAAAGCCGTTGCAAACACTTTCGGGAAAAAGCGTGCACACTTAGAAATTCATAGCCCTAAAGTTGGTTATGCAAATTCACCTTCGAGCAAGGAGGAAGTTGATTCTGATGGCCATGGCAATGGGTTTGTTACTGCTAGAGCCAAATTAGGTTGTCCAATAGATACCGATGAAGAAAAAACTATAGTGACCGCCATAACTGTATCACTTCACAGTTGCGATGTGATACTGGATCACAATGATGTGGCTGCATCGGACCATGTCAAATTCAAAAACAATTTATTAATCACAAAAAAAAATCGCACCGCAACGGTTGCAATCCGCATCGCAATGACCACAATGACCTCAATCGCAGAATCTATAACCATGACTGAAATGGAAGCAAGGCAGAAGCGAGGAGGTGTTGGTTCACCAAGTGCAGCAGTCTCACCACAATGCGATAGCAATCCTGGCAATAGGTTATATGGTGGGAGATCATATGGTGTTTCACGACGTGGTGTCCGTGGTAATTTTGTTCCTCCTATTAAATCAAATGGGAACAATGTTGGAAATATGACTTCACGAAATGGTGGAAAGTGTGATGATTCTTTAGAGGACTCTACTAAGCGATGTTTGGAAATGCTGTATGGGCCTGATGGTGAGCTTCCTGAGAAATTGAGGAATTTGGAACCTCGCCTCATTGAACATATTAGTAATGAAATTATGGATCGTGATCCCAATGTACGGTGGGATGACATTGCGGGATTGGATCATGCTAAGAAGTGTGTCACTGAAATGGTCATATGGCCTCTGCTACGTCCTGACATATTTAAGGGTTGTCGTTCCCCTGGGAAGGGTCTGCTTCTATTTGGTCCACCGGGAACTGGTAAAACAATGATTGGAAAAGCCATAGCCGGGGAAGCAAAGGCAACTTTCTTTTACATATCTGCAAGTTCGTTGACAAGCAAGTGGATTGGAGAAGGAGAAAAGCTAGTAAGAGCTCTTTTTGGAGTTGCTAGTTGCCGTCAACCAGCAGTAATTTTTGTTGATGAGATAGATTCACTTCTGTCTCAGCGTAAGTCAGAGGGTGAGCATGAATCAAGTAGACGGCTAAAGACACAATTTCTAATTGAAATGGAAGGCTTTGACAGTGGCAACGAACAAATTTTGCTTATAGGTGCAACAAATCGTCCTCAAGAACTTGATGAAGCAGCACGAAGGAGACTTACTAAAAGACTATATATCCCTCTACCCTCAACAGAGGCTAGAGCTTGGATTGCACGTAACCTCCTTGAGAAAGATGGGTTATTCAAGCTATCAAATGAGGAAATAGATATCATATGCAACCTAACAAAAGGTTATTCAGGATCTGACATGAAGAACTTAGTGAAGGATGCTTCTATGGGACCCCTAAGAGAAGCTTTAAGACAAGGCATAGAAATTACAAAGTTGAAAAAGGAGGATATGCGACCAGTAACCCTTAAGGATTTTGAAAATGCCCTACAAGAGGTGAGACCTTCTGTTTCCCCACATGAACTTGGCACTTATGATGATTGGAACAAGCAATTTGGAAGCCTTTCACTGTAA 2250 0.4249 MKPNSPTFEKLGGKENTMKERHKKPHPNSSSSSSFSSPMEEPKEKCWRQEVDENLHRLHSLHFGAELALDNNDFHSAHIFSLRLLGFLDSHTVSAVDQTFVHPIRRQVLSNVHSLRRSLVPDSDRRAFEQAKKSPGLVFGATGDIDIDKIRKSKFFQALNENVDNQLGDQQGKQHKTCDKASKERVQAKLTTIYEKSIFKTNSSEDCMVVERPQSSTKGRAFFSFDEEEKAVANTFGKKRAHLEIHSPKVGYANSPSSKEEVDSDGHGNGFVTARAKLGCPIDTDEEKTIVTAITVSLHSCDVILDHNDVAASDHVKFKNNLLITKKNRTATVAIRIAMTTMTSIAESITMTEMEARQKRGGVGSPSAAVSPQCDSNPGNRLYGGRSYGVSRRGVRGNFVPPIKSNGNNVGNMTSRNGGKCDDSLEDSTKRCLEMLYGPDGELPEKLRNLEPRLIEHISNEIMDRDPNVRWDDIAGLDHAKKCVTEMVIWPLLRPDIFKGCRSPGKGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSEGEHESSRRLKTQFLIEMEGFDSGNEQILLIGATNRPQELDEAARRRLTKRLYIPLPSTEARAWIARNLLEKDGLFKLSNEEIDIICNLTKGYSGSDMKNLVKDASMGPLREALRQGIEITKLKKEDMRPVTLKDFENALQEVRPSVSPHELGTYDDWNKQFGSLSL 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0140 749 MobiDBLite consensus disorder prediction 398 424 - -
Lal10g0140 749 CDD AAA 501 638 - -
Lal10g0140 749 MobiDBLite consensus disorder prediction 13 27 - -
Lal10g0140 749 PANTHER AAA DOMAIN-CONTAINING 104 746 - -
Lal10g0140 749 Pfam Vps4 C terminal oligomerisation domain 711 745 IPR015415 -
Lal10g0140 749 Gene3D - 467 741 IPR027417 -
Lal10g0140 749 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 467 744 IPR027417 -
Lal10g0140 749 Gene3D - 639 725 - -
Lal10g0140 749 MobiDBLite consensus disorder prediction 1 46 - -
Lal10g0140 749 ProSitePatterns AAA-protein family signature. 610 629 IPR003960 GO:0005524|GO:0016887
Lal10g0140 749 SMART AAA_5 504 640 IPR003593 -
Lal10g0140 749 MobiDBLite consensus disorder prediction 402 419 - -
Lal10g0140 749 PANTHER FIDGETIN-LIKE PROTEIN 1 104 746 - -
Lal10g0140 749 Pfam ATPase family associated with various cellular activities (AAA) 508 638 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0140 Lal-Chr10 1606016 1616978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0140 423 747 Calmodulin-binding Proteins AT3G56690 31.642 1.39e-42 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0140 K22766 - vvi:100256552 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0140 10 1606016 1616978 Lal10g0140 10 1606016 1616978 ECH