Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0116 ATGAAGAAAACCAAAGCTTTTGGACATAGAAATAGAACCAAAACAAGAAAACCAAAGTATCTTAGTCTCAACCTTCAACTTTCTCAACCCAAAAACATAACAATGATTCAACAGCAACAACAACAACTGAATCTCTTTCCTTTGCACCCTGAAAACAACACAGTGGTTGAGGAAAAAGACATGCACGAAGAGAACAACGTAGCTTTGTTCTTCAGTTCAGATGGTGGTGCCACACTTAATGGTTTACTTGAAGATGAATCAACCACCACCACAACCACCACCGTGACTACCGATACAAAGAATATCACGGCTGCAACGACGACGACGGAGGAGGAGGAGGGAGAGAGTGGAAGGTGGTTGGTGAGGAAAGCGATGAGGAGAAGTAACAAAGAAAGGAGGGTGGTGGAGGATGATGATGATGGTGGTGATGAGAGTGAGGAAAGGTGGGTTTGTTACTCGGAGGTGGTGGAGGAGAAGAGAGAGATGATGGAGGAAGTGAGTAGCGCCACCGTGACAGCCACCGTGGGTGTTAATACGACGTCGTTTGGGGTATTATCATTGAAGTTGGATCATGAAGGGATAATGAATGAGTGGTCTGAGAAAGGTTCTCTTTACATTGCAGAAGGAGAGGTCCCACAAACTGTACCTGATTTAGTCAATGATCTCCATTTTCATAATGCTCTTCTTCCCAATGTTCCATGGGATAGTTGGTGCAGTGATGATGTTGAGAGAACATGGATTGTTCCAGAATGTTGTGATGCTAACAGCATGAAGGTGAAGGAAGAAATTGGTTTGAAGCTGAAGCAGAGAGAGGAAAGTGTACTTAGATACAAAGAGAAGAGGCAAAATAGACTCTTTTCGAAGAGAATCCGCTATGAAGTTCGCAAGCTCAATGCTGAGAAGAGGCCTAGGATGAAGGGACGATTTGTGAAGAGGGAATGA 942 0.4395 MKKTKAFGHRNRTKTRKPKYLSLNLQLSQPKNITMIQQQQQQLNLFPLHPENNTVVEEKDMHEENNVALFFSSDGGATLNGLLEDESTTTTTTTVTTDTKNITAATTTTEEEEGESGRWLVRKAMRRSNKERRVVEDDDDGGDESEERWVCYSEVVEEKREMMEEVSSATVTATVGVNTTSFGVLSLKLDHEGIMNEWSEKGSLYIAEGEVPQTVPDLVNDLHFHNALLPNVPWDSWCSDDVERTWIVPECCDANSMKVKEEIGLKLKQREESVLRYKEKRQNRLFSKRIRYEVRKLNAEKRPRMKGRFVKRE 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0116 313 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 313 - -
Lal10g0116 313 PANTHER CCT MOTIF FAMILY PROTEIN 1 313 - -
Lal10g0116 313 Pfam CCT motif 270 312 IPR010402 GO:0005515
Lal10g0116 313 ProSiteProfiles CCT domain profile. 270 312 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0116 Lal-Chr10 1309963 1314453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0116 175 312 C2C2-CO-like Transcription Factor Family AT1G68520 38.816 1.52e-17 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal10g0116 CCT 1.2e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0116 - - adu:107494886 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0116 10 1309963 1314453 Lal10g0116 10 1309963 1314453 ECH