Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0105 ATGATGATGAATGAGAATAAGAAGAAGAAGAAGAGTGGTAGACTTGAATGGTCTATAGAACTGCACAATAAATTTGTGGATGCTGTAAACCAATTAGGCATTAAGAAAGCTTCACCTCAAAAAATTCTGCAGTTGATGAATGATGAAAATCTCACATATAAGCATGTAGCAAGTCATCTCCATAAATATAAACTTCACATCACAAGAACTAGCACATTTGTGCCACACCAACAACAATGTTCTACTCTTGTTCAAAATATAAATGAGTTGCCTTCTTCTTCTTCAACAAAACAGTTGGGTCAAAGCAACAACACAAACGATAAAGATATGTTCTCTACAAGTACTCCAAGTAATGAGCCATTTGATTATCTTTATGTCGATTTTGACATGTTAGAG 396 0.3409 MMMNENKKKKKSGRLEWSIELHNKFVDAVNQLGIKKASPQKILQLMNDENLTYKHVASHLHKYKLHITRTSTFVPHQQQCSTLVQNINELPSSSSTKQLGQSNNTNDKDMFSTSTPSNEPFDYLYVDFDMLE 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0105 132 SUPERFAMILY Homeodomain-like 11 69 IPR009057 -
Lal10g0105 132 MobiDBLite consensus disorder prediction 85 115 - -
Lal10g0105 132 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 14 66 IPR006447 GO:0003677
Lal10g0105 132 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 68 IPR017930 -
Lal10g0105 132 Gene3D - 8 70 - -
Lal10g0105 132 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 10 113 IPR044841 GO:0003700|GO:0006355
Lal10g0105 132 Pfam Myb-like DNA-binding domain 15 64 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0105 Lal-Chr10 1179348 1180245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0105 4 77 Response Regulator Gene Family AT3G16857 50.000 1.30e-19 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal10g0105 Myb_DNA-binding 1.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0105 - K14491 egu:105052947 91.6633