Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0089 ATGGCGTCGTTTCTCACAATCTTCACTATCATTCTCTCTTCTCTTCAATTCCTCATATCTCATTCTCATTCTGCAGTTTTCACCGTAGATCTAGGTTCTGAATCGCTCAAAGTCGCTGTTGTAAACCTAAAACCTGGTCAGATCCCAATCTCCGTCGCGATCAATGAAATGTCCAAGCGTAAATCTCCGGCGTTGGTTTCATTCAACTCCGGCGACCGTCTCCTCGCTGAAGAAGCCGCTGGACTCGTCGCTCGTTATCCGCAAAACGTTTTCTCGCAAATTAGGGACCTCGTTGGGAAACCCTACGATTTCGCCACCAAATATCTCGATTCAGCGTACTTGCCGTTTGAGGTTGAACCAGATTCGAGAGGCGCGGTGAGTTTTAAAGTAGATAATGAAAACGGAACCGTTTATTATTCTCCTGAAGAGTTGGTTGCTATGGTTTTGAGCTACGCAGTGAGTTTAGCGGAGTTTCATTCTAAGATTCCGATTAAAGATGCAGTGATAACTGTGCCGCCGTATTTCGGGCAATCTGAACGGAAAGGGATTATTCAGGCGGCGAATTTAGCGGGGATTAACGTTCTTTCGTTGATTAACGAGCATTCTGGTGCAGCTTTGCAGTATGGGATAGATAAGGATTTCTCAAACGAGACAAGGCATGTTATATTTTATGACATGGGTTCAGGGAGTACTTATGCTGCGCTTGTGTATTTCTCAGCGTATAAAAGTAAGGAGTATGGGAAGTCTGTGTGGGTGAACCAGTTTCAAGTTAAGGATGTCCGTTGGAACCCAGAGCTGGGTGGTCAGAATATGGAAATGCGATTGGTGGAGTATTTTGCTAATGAGTTCAATGCACAAGTTGGTAATGGAATAGATGTGAGGAAATTCCCCAAGTCTATGGCTAAATTGAAGAAACAGGTTAAAAGAACAAAAGAAATTCTTAGTGCAAACACAGCAGCTCCCATTTCAGTTGAATCACTTCATGGTGAAATAGATTTCAGGAGCACAATAACCCGTGAGAAGTTTGAAGAGCTTTGTAAAGATATTTGGGAAAAATCTCTTTTACCTGTGAAAGAGGTGATTGAGAATTCAGGCTTGTCCGTGGACCAAATATATGCAGTAGAATTAATTGGAGGTGCTACCAGAGTTCCGAAGTTACAGGCTAAGCTTCAAGAGTTTCTTGGGAGAAAAGAACTTGATAGGCATCTTGATGCTGATGAAGCAATAGTTCTTGGTGCAGCTCTTCACGCTGCAAATATAAGTGATGGAATCAAATTGAACCGCAAACTCGGAATGGTAGACGGTTCCTTGTATGGATTTGTGTATGAGTTGAATGGTCCTGATATTTCGAAAGATGAAAGCTCTAGGCAGTTACTTGTACCACGAATGAAGAAACTACCAAGCAAGATTTTCAGATCCATTAAGCATAACAAAGATTTTGAAGTTTCCCTTGCTTATGAAAGTGAAAATCAATTGCCACCTGGTGTTTCATCTCCTCAAATTGCTCAATATCAGATATCTGGCTTGACAGATGCAAGTGAGAAATACTCATCTCGGAACCTGTCGTCCCCCATCAAGGCAAATATACACTTCTCCCTTAGTAGGAGTGGAGTTCTTTCTCTGGATCGGGCAGATGCTGTTATTGAAACAATGGAGTGGGTAGAAGTTCCTAAAAAGAATTTGACCATAGAGAATTCAACTATTTCATCAAACCAATCAAATGAAGCTGGTGCTGCAAACAGTTCCGAGGAAAGCAATGAAAACTTGAAAACTGGTAGTGGGTCTAGTAAGACCTCCAACATTAGCACAGAGGAGCAAAATGCTAAAGAACCAACCACAGAGAGAAAGCTGAGAAAGAGGACCTTTAGGGCTCCATTAAAGATTGTTGAGAAGATAACAGGACCTGGAGTGTCTCTATCAAAAGAGTTTCTTGCTGAAGCTAAAGGCAGATTAGAAGCACTAGACAAAAAAGATGCAGAAAGGAAAAGAACAGCAGAGTTAAAAAATAATTTAGAAGGATATATTTATACTACTAAGGAGAAGATCGAAACTCTTGAGGATTTTGAAAGGGTTTCTACCGCTGAGGAACGCCAGTCTTTTATTGAGAAGCTTGATCAGGTGCAAGATTGGTTATATATGGATGGTGAAGATGCCAATGCTGATGAGTTTCAAGAACGTCTGGATACGTTAAAAGCTGTTGGTGATCCAATTTTCTTCAGGTTAAAAGAGCTTACAGCTCGTCCATTAGAAGTTGAGCATGCCCATAAATACCTTGGTGAGCTGAAACAGATTGTACAAGAGTGGAAAGCCAAAAAGTCTTGGCTTCCAAAAGAACGAGTAGATGAGGTTTTAGGTGATGCTGAAAAGTTAAAGAAATGGTTGGATGAGAAAGAGACTGAGCAAAAGAAGGCATCCGTATTCAGTGCACCAGTATTTACTTCTGAAGAAGTATATCTAAAGGTGCTTCTCCTGCAAAACAAGGTTTCTAGTATTAATAGAATTCCCAAGCCCAAGCCAAAAATTCAGAAGCCTGTGAAGAATGAAAGTGAAAGTGGTGGCTGGAAAACCGATAATTCTAGCTCCACCTCAACTGATAGCTCTTCTTCTTCAAGTGATCAATCTGCTAACAATTCAAACAACGAAACTGATGAAAAAGTCGATGATCAAGCCGAAGTTCATGATGAGTTATGA 2691 0.411 MASFLTIFTIILSSLQFLISHSHSAVFTVDLGSESLKVAVVNLKPGQIPISVAINEMSKRKSPALVSFNSGDRLLAEEAAGLVARYPQNVFSQIRDLVGKPYDFATKYLDSAYLPFEVEPDSRGAVSFKVDNENGTVYYSPEELVAMVLSYAVSLAEFHSKIPIKDAVITVPPYFGQSERKGIIQAANLAGINVLSLINEHSGAALQYGIDKDFSNETRHVIFYDMGSGSTYAALVYFSAYKSKEYGKSVWVNQFQVKDVRWNPELGGQNMEMRLVEYFANEFNAQVGNGIDVRKFPKSMAKLKKQVKRTKEILSANTAAPISVESLHGEIDFRSTITREKFEELCKDIWEKSLLPVKEVIENSGLSVDQIYAVELIGGATRVPKLQAKLQEFLGRKELDRHLDADEAIVLGAALHAANISDGIKLNRKLGMVDGSLYGFVYELNGPDISKDESSRQLLVPRMKKLPSKIFRSIKHNKDFEVSLAYESENQLPPGVSSPQIAQYQISGLTDASEKYSSRNLSSPIKANIHFSLSRSGVLSLDRADAVIETMEWVEVPKKNLTIENSTISSNQSNEAGAANSSEESNENLKTGSGSSKTSNISTEEQNAKEPTTERKLRKRTFRAPLKIVEKITGPGVSLSKEFLAEAKGRLEALDKKDAERKRTAELKNNLEGYIYTTKEKIETLEDFERVSTAEERQSFIEKLDQVQDWLYMDGEDANADEFQERLDTLKAVGDPIFFRLKELTARPLEVEHAHKYLGELKQIVQEWKAKKSWLPKERVDEVLGDAEKLKKWLDEKETEQKKASVFSAPVFTSEEVYLKVLLLQNKVSSINRIPKPKPKIQKPVKNESESGGWKTDNSSSTSTDSSSSSSDQSANNSNNETDEKVDDQAEVHDEL 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0089 896 MobiDBLite consensus disorder prediction 565 607 - -
Lal10g0089 896 Gene3D - 29 418 - -
Lal10g0089 896 PRINTS 70kDa heat shock protein signature 57 69 - -
Lal10g0089 896 PRINTS 70kDa heat shock protein signature 167 187 - -
Lal10g0089 896 PRINTS 70kDa heat shock protein signature 371 387 - -
Lal10g0089 896 PRINTS 70kDa heat shock protein signature 403 423 - -
Lal10g0089 896 MobiDBLite consensus disorder prediction 565 619 - -
Lal10g0089 896 Pfam Hsp70 protein 27 739 IPR013126 GO:0005524|GO:0140662
Lal10g0089 896 Gene3D - 213 400 - -
Lal10g0089 896 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 428 570 IPR029047 -
Lal10g0089 896 PANTHER HSC70CB, ISOFORM G-RELATED 22 826 - -
Lal10g0089 896 MobiDBLite consensus disorder prediction 881 896 - -
Lal10g0089 896 SUPERFAMILY Actin-like ATPase domain 219 419 IPR043129 -
Lal10g0089 896 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 666 746 IPR029048 -
Lal10g0089 896 CDD HYOU1-like_NBD 29 418 - -
Lal10g0089 896 SUPERFAMILY Actin-like ATPase domain 29 212 IPR043129 -
Lal10g0089 896 Gene3D - 92 147 - -
Lal10g0089 896 MobiDBLite consensus disorder prediction 833 896 - -
Lal10g0089 896 Gene3D - 639 751 IPR029048 -
Lal10g0089 896 MobiDBLite consensus disorder prediction 849 880 - -
Lal10g0089 896 ProSitePatterns Heat shock hsp70 proteins family signature 3. 374 388 IPR018181 -
Lal10g0089 896 Gene3D Actin; Chain A, domain 4 267 352 - -
Lal10g0089 896 PANTHER HEAT SHOCK 70 KDA PROTEIN 17 22 826 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0089 Lal-Chr10 964207 974540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0089 50 534 Calmodulin-binding Proteins AT3G12580 28.980 1.26e-62 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0089 K09486 - gmx:100786898 1365.9