Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0085 ATGAATTCCAATTCCAATGATGTTGATGTTGTTGAGAAAGATCCAACTTCGCGATATTTACGCTACGATGAGATTTTGGGGAAAGGAGCATGCAAGACTGTATATAGGGCATTTGATGAAATAAATGGAATTGAGGTTGCGTGGAATCATGTTAGTATTGAGGATGTTTTGCAGTCATCGCAGCAGCTAGAAAGATTATATTCTGAGATTCATCTTCTCAAGTCATTGAAACATGAAAATATCATTAAGCTCCATAATTCTTGGGTGGATGATAATAACAAGAGTATCAACATGATTACCGAGTTATTCACCTCTGGTAGTTTGAGGCAGTATCGGAAGAAACATAAGAATGTTGATATGAAAGCCATCAAGAACTGGGCAAGGCAGATTCTTCGAGGCTTATGCTATCTGCATAGTCATAGTCCTCCAATAATTCATAGGGATCTTAAATGTGATAATATTTTTGTTAACGGCAATAATGGACATGTTAAGATTGGAGATCTTGGATTGGCAATTGTAATGCAGCAACCTACTGCCCGAAGTGTTATAGGTACACCAGAGTTCATGGCCCCAGAGCTATATGATGAAGAATATAATGAACTTGTTGATATATATTCCTTTGGCTTGTGTATGTTGGAAATGATCACCTGTGAGTACCCGTACAGTGAATGTAAAAATCCGGCCCAGATATATAAGAAAGTTACATCTGGTATAAAACCTGCTGCTCTTGCCAAAGTAAATGATCCGGAAGTGAAGCGGTTTATCGAGAAGTGTCTAGTTCCAGCTTCTATGAGATTGCCTGCATCTGAACTACTGAAAGACCCATTCCTTGCAACTGAAAACGCAAAGGAGATCAATCGTGAATTACCGCAGATGCCTATTCTACCCATCAAATTAGTGAACCCACCAATATCAGTGCCGCATTCTATGGAGATAGACTCGAATGTCCGGCATACTTCAACTGGCTCCGCTGTTAGAACTATTGAAGAAGCCTCTCAAGTTGCAATCTTTGACCTCATCAGGATGACTGATAATAATGAGTTTAGGTTAAGAGGAGAAAAAGATGGTCGAGCAAGGAATATCCATTTTCCGTTCTTTATCGATTCGGATACAGCAATTTCAATTGCCGCGGAGATGGTGGAACATCTGGAACTCGCAAGTGAGGATGTAGCTGTCATTGCTGAGCTAATACACGACATGATTGTGAAGCTTGTGCCAAACTGGCAACCCTCATGTCAGGACCTTCAATTTCGAACAGATCATTTATGCAACTCTCCCGATGTTCAGAATGGTGAAATAAGAAATTGCCATTGGCCACCACTGTCAAGTGATTTTGATAAGAAGAAAGCCGATGGGGATTTTGTTCTTTCAAAACATATTGATGTGGAAGATCAGGAAAAGCAAGAATCTGTTATCTCAGATATTTCAGTAGAGTATGGGGTTCAAGCTGCCTCATATTCTATAGACCATGATTTTTCAATTCTTGATGATTGCTCCAATGGCTTCAATTGCAATTCAGATTTCATGTTTTGTGGTCAAGAAGATGATGGACACAAGAATAAAACTACTAATCAATCAGAGAATCACTCAGCAAGCTCTCTGATGAATTCGTGTTGCAGCGCATCGGAAATATTTGACATGTCAAGCATTTGTTCTCTCAATCTAGCCGACAAAGATCATTCCGGTGATGAACTGCAGTTGGAGCTTGATGAAATAGATTTACAGTATCAGCAATGCTTTTATCAGCTTCAGAAGATGAGGGAGGAAGCCATAGAAAATGTCAAAAGGAAATATAGGTCATTTGATGCATTAGGATGA 1818 0.3944 MNSNSNDVDVVEKDPTSRYLRYDEILGKGACKTVYRAFDEINGIEVAWNHVSIEDVLQSSQQLERLYSEIHLLKSLKHENIIKLHNSWVDDNNKSINMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLCYLHSHSPPIIHRDLKCDNIFVNGNNGHVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYDEEYNELVDIYSFGLCMLEMITCEYPYSECKNPAQIYKKVTSGIKPAALAKVNDPEVKRFIEKCLVPASMRLPASELLKDPFLATENAKEINRELPQMPILPIKLVNPPISVPHSMEIDSNVRHTSTGSAVRTIEEASQVAIFDLIRMTDNNEFRLRGEKDGRARNIHFPFFIDSDTAISIAAEMVEHLELASEDVAVIAELIHDMIVKLVPNWQPSCQDLQFRTDHLCNSPDVQNGEIRNCHWPPLSSDFDKKKADGDFVLSKHIDVEDQEKQESVISDISVEYGVQAASYSIDHDFSILDDCSNGFNCNSDFMFCGQEDDGHKNKTTNQSENHSASSLMNSCCSASEIFDMSSICSLNLADKDHSGDELQLELDEIDLQYQQCFYQLQKMREEAIENVKRKYRSFDALG 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0085 605 Gene3D Phosphorylase Kinase; domain 1 4 101 - -
Lal10g0085 605 Gene3D - 345 430 - -
Lal10g0085 605 SMART serkin_6 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0085 605 ProSiteProfiles Protein kinase domain profile. 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0085 605 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 358 401 IPR024678 GO:0004674|GO:0005524
Lal10g0085 605 SUPERFAMILY Protein kinase-like (PK-like) 21 324 IPR011009 -
Lal10g0085 605 Gene3D Transferase(Phosphotransferase) domain 1 103 285 - -
Lal10g0085 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Lal10g0085 605 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0085 605 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 598 - -
Lal10g0085 605 PANTHER WNK KINASE 1 598 - -
Lal10g0085 605 CDD STKc_WNK 18 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0085 Lal-Chr10 937631 941044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0085 3 598 MAP Kinase Kinase Kinase AT5G41990 50.245 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lal10g0085 Pkinase 5.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0085 K08867 - gmx:100783717 805.438