Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0084 ATGAGTAATGACCGAAGCTTTTCTGTTAACCCCGCCGATTATCAGCTTCTTGAAGAAGTTGGTGACGGCGCCACCGCCACCGTTTACAGAGCTAACTTTCTTCCTCTTAACCAACTCGTCGCTATTAAGACCTTGGATCTCGATCGATGCACTCTTAATCTGGATGATATAAGGAGAGAGACTCAAACAATGAGTTTGATTGATCATCCTAATGTTGTGAGAGCTTTTTGTTCTTTCATTGTGGAGCATAGCCTTTGGGTGGTGATGCCATTCATGAATGAGGGTTCTTGTTTGCATCTCATGAAGTCAGCATATCCTGATGGGTTTGAAGAGGACGCAATTGGATCTATACTCAAAGAGACACTCAAGGCTTTGGAGTATCTTCATCAACAAGGCCATATACATCGAGATGTTAAGGCTGGTAACATTTTACTTGATAGCAGTGGCGCAGTAAAGCTTGGTGACTTTGGTGTATCCACTTGCATGTTTGATAGTGGTGATAGACAGCGATCGAGAAATACGTTTGTGGGGACTCCTTGCTGGATGGCTCCGGAGGTACTGCAACCAGGAAGTGGTTATAATTCCAAGGCTGATATTTGGTCTTTTGGAATTACGGCTCTGGAGTTGGCTCATGGTCATGCACCATTTTCAAAATATCCTCCAATGAAGGTTCTTCTAATGACCATACAGAACGCCCCTCCTGGACTTGATTACGACCGTGATAAAAAGTTCTCTAAGTCTTTTAAGGAAATGGTTGCAATGTGCCTGGTGAAAGATCAAACAAAGAGGCCATCAGCAGAGAAGTTACTGAAACATTCCTTCTTCAAAAATGCTAAGCCTCCTGAGCTTTCTGTGAAGAAATTGTTTGCTGACTTACCACCTCTTTGGAATCGTGTAAAATCCCTCCAGCTTAACGACGCAGCTCAATTAGCACTGAAGAGAATGCCTTCTGCAGAACAAGAAGCAATATCTCAGAGTGAATACCATCGAGGAGTTAGTGCATGGAACTTTGACGTTGATGATTTGAAAGCTCAAGCTTCGTTGGTGCGGGATGACGATGATATTGTAGACATAAGGGAAGAAGAATACAAGGTTGATGTAACTGATTCCCAGTCTGATGCTGGCAAAGAGAATACCAATAACTCACCAAAGGATGAGATCACTTCATATGTAGATGGTAGTGACATACAACATATTGAGCAGAGTGAATATGCGAACAAAAAGAAGATTCTTGAAAGTGATATGCCAGAACCTGGATTGCCCAATAATTTTATTTGGAATAGAAATGGATCAATAGCAGAGGCAACATCTACTATAGAGAAGGATGCTGGTTTGAGCAAGATTAAAACTCAATCTGGGAAAAATCATCAAACCCACAGTGGGCCATTGGTGCCAGACGCAGTCCTCAGTCGTTCTTCAACAGAAAGAGGACGTACATTTGAAAGTACTTCTAGGCTTGAGAATGGGAATCAATTACCAAGTGAGAAAAATAATCGTCAAGTGCGACGAGCTCCAAGTTTTAGTGGCCCATTGATGCTCCCAACACGAGCTTCGGCAAATAGTTTATCCGCTCCAATAAAGTCCTCTGGAGGTTTCAGAGATTCCATGGACGACAGGTTTAAGGCTAATCTAGTGCAAATTAAAGGGAGATTCTCCGTGACATCAGAAAATTTAGATCTTGTGAAGGATATTCCTTTATGTTCAGTGTCACACCGATCTTCACAGGGATCAACAATTCATAAATCTGCTAGCGTTTGTGATTGGATGTCGGATTCTAAACAAATGATTGGTCAGGCCCCCACAAGTACTGCCACTTCCAACATCTCTGGATCACTTCTTGTGCCTCATCTTCAAAATCTTTTCCAGCAGACATCTATTCAACAGGGCCTTATAATGAATTTGTTGAATAGCTTGCAACAAGATGAAGCAAATGATGTTTCACAGAATGGAAAGTTACCACCATTACCTAATGGTTCAGAGGACAATGGAAGTGTTGAGACAGCTGCTACAGAGAGGGAACGTGCTCTTCTGGCCAAAGTTTCAGAACTTGAGGCTCGGATGATCAATTTGACCGAAGAACTGGATGCTGAGAAATTGAAAACCATTCAGTTGCAAGAACAACTGAACAATGAGGAACAAAATGGGGACATAACAGAGGAAGTTGCATAA 2169 0.4214 MSNDRSFSVNPADYQLLEEVGDGATATVYRANFLPLNQLVAIKTLDLDRCTLNLDDIRRETQTMSLIDHPNVVRAFCSFIVEHSLWVVMPFMNEGSCLHLMKSAYPDGFEEDAIGSILKETLKALEYLHQQGHIHRDVKAGNILLDSSGAVKLGDFGVSTCMFDSGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPSAEKLLKHSFFKNAKPPELSVKKLFADLPPLWNRVKSLQLNDAAQLALKRMPSAEQEAISQSEYHRGVSAWNFDVDDLKAQASLVRDDDDIVDIREEEYKVDVTDSQSDAGKENTNNSPKDEITSYVDGSDIQHIEQSEYANKKKILESDMPEPGLPNNFIWNRNGSIAEATSTIEKDAGLSKIKTQSGKNHQTHSGPLVPDAVLSRSSTERGRTFESTSRLENGNQLPSEKNNRQVRRAPSFSGPLMLPTRASANSLSAPIKSSGGFRDSMDDRFKANLVQIKGRFSVTSENLDLVKDIPLCSVSHRSSQGSTIHKSASVCDWMSDSKQMIGQAPTSTATSNISGSLLVPHLQNLFQQTSIQQGLIMNLLNSLQQDEANDVSQNGKLPPLPNGSEDNGSVETAATERERALLAKVSELEARMINLTEELDAEKLKTIQLQEQLNNEEQNGDITEEVA 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0084 722 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 2 711 - -
Lal10g0084 722 Gene3D Phosphorylase Kinase; domain 1 3 91 - -
Lal10g0084 722 MobiDBLite consensus disorder prediction 448 505 - -
Lal10g0084 722 MobiDBLite consensus disorder prediction 365 394 - -
Lal10g0084 722 Coils Coil 673 714 - -
Lal10g0084 722 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 711 - -
Lal10g0084 722 MobiDBLite consensus disorder prediction 372 394 - -
Lal10g0084 722 MobiDBLite consensus disorder prediction 643 665 - -
Lal10g0084 722 CDD STKc_OSR1_SPAK 13 275 - -
Lal10g0084 722 MobiDBLite consensus disorder prediction 643 669 - -
Lal10g0084 722 MobiDBLite consensus disorder prediction 472 504 - -
Lal10g0084 722 SMART serkin_6 14 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0084 722 SUPERFAMILY Protein kinase-like (PK-like) 13 329 IPR011009 -
Lal10g0084 722 ProSiteProfiles Protein kinase domain profile. 14 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal10g0084 722 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Lal10g0084 722 Gene3D Transferase(Phosphotransferase) domain 1 95 323 - -
Lal10g0084 722 Pfam Protein kinase domain 14 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0084 Lal-Chr10 921867 935835 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0084 7 708 MAP Kinase Kinase Kinase Kinase AT4G10730 64.880 0.0 889
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Lal10g0084 Pkinase 3.3e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0084 - - gmx:100809903 1027.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0084 10 921867 935835 Lal10g0084 10 921867 935835 ECH