Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0065 ATGATGAATAAGAATAAGGATCATGATAAGAAGAACAAGAAGCCTCGACTTGCTTGGTCGGAAGAGTTGCATCGCAAGTTTGTTCATGTTGTTAATCTTTTAGGAATTGAGAATGCTGTACCTAGAAAAATTCTTGAGTTGATGAATGATGAAAGGCTTACAAAGGAGAATGTGGCGAGTCATCTTCAGAAATATAAACTTTCTCTGAAAAGAATTAGCAGCAACTCTGTGCCAAGTAAAAATGGTTCTATAATTGGTTGTGGACAATTTCAGAATATTTCTCCAAGTAATCCTGTTTATCAGAACGATGTTGTTCAAGAAATGCCGATGCCAACATGGCATTCCGATGAAAGCCTTGATTCGTTGTTCGATGATGTGTTTTTGCAATGGTGGGAAGACCATAATAAGGACGCAACTGGCCTTTCAGATGTTATTGGTACCTCACCAAACACTCTGACTCCATTGATGGACGCTGTTAATAGAAATCTTGGATCAACACAAGACTTGGTTACTGTTGCATCTCCCAGCTGCATCTCGCACGAGTCGATCGAGATCGGAGAGCTGAGACAAGAGATTGCTGCAACCAGAACCGAGACTCAACAATTGAGGGAGACGATCCAAGCGTTGAAGGCACAACAGGACATGTTGGTGCAAGTTGTTTTACAGCTTCTCCCACCCAATGTGGTAATGCAACAATAG 699 0.4134 MMNKNKDHDKKNKKPRLAWSEELHRKFVHVVNLLGIENAVPRKILELMNDERLTKENVASHLQKYKLSLKRISSNSVPSKNGSIIGCGQFQNISPSNPVYQNDVVQEMPMPTWHSDESLDSLFDDVFLQWWEDHNKDATGLSDVIGTSPNTLTPLMDAVNRNLGSTQDLVTVASPSCISHESIEIGELRQEIAATRTETQQLRETIQALKAQQDMLVQVVLQLLPPNVVMQQ 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0065 232 Coils Coil 185 212 - -
Lal10g0065 232 SUPERFAMILY Homeodomain-like 13 71 IPR009057 -
Lal10g0065 232 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 172 - -
Lal10g0065 232 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 172 IPR045279 GO:0009736
Lal10g0065 232 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 70 IPR017930 -
Lal10g0065 232 Gene3D - 10 73 - -
Lal10g0065 232 Pfam Myb-like DNA-binding domain 17 66 IPR001005 -
Lal10g0065 232 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 14 67 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0065 Lal-Chr10 766095 768765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0065 10 72 G2-like Transcription Factor Family AT5G59570 65.079 7.92e-23 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal10g0065 Myb_DNA-binding 5.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0065 - K14491 lang:109344458 334.724