Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0032 ATGTCAAACAATAACAACCTCGGATCTCTCCTCTTACGCCACCACCACCACCATTCCAAGTCCGCCACCACTCTCCGCCTATGTCACTCATCCTTCCGCCGCATCATCTTTGACTCCATCACCTGCGGCTCCATCTCCCGCCGCCACAACACAACGCCCCCGTTATCGGAGGAGGATGACGACTCCCAAGACGAGAAGAGTGTGAAGCCAGATACGAGGTTGTCGGAGAAGCTGTCGGATCTGCTGAACATGGAAGAGACGGAAGCGAAGGAGGAGGCATTGGAGGAGTTGAAGAAGGTGGTGAAGGAGTTGCAGAAGCAAGAAGAGGATACACGGCGGAGAGTGGCGGCGGCAGCCATGGTGAGAAAGGTGGCGAAGGAAGATGTGGAGGTTAGAGAAACGCTTGCAATGCTTGGAGTGATTCCTCCAATAGTAGCAATGCTTGATTCTGAAGATGTTCATTCTCAGATCGCTTCTCTCTATGCTTTGCTTAATCTCGGAATCGGAAACGATGCGAATAAAGCGGCGATTGTTAAAGTTGGTGCTGTTCAGAAGATGCTCAAGCTGATTGAGTTACCAGGGGGTCCAAATTCACTAGTCTCTGAAGCAATTGTTGCAAATTTTCTCGGATTGAGTGCTTTGGATTCGAACAAACCCATAATTGGGTCCTCAACTGCAATATCATTCCTAGTTAGAACCCTTCAGAGTTTAGATGATAAAACTAGCCCCCAATCTAAGCAAGATGCTCTCAGAGCACTATACAATATTTCGATCTTTCCAGGCAATGTTTCGTGCATTTTGGAAACCAACTTGGTCCATTTTCTGGTAAACTCAATAGGAGACATGGAATTAACCGAGAGAACCCTCTCAATTTTAAGCAACTTGGTATCAACTCGAGAGGGTAGGAAAGCTATTAGCGCGGTGCCAGATGCGTTCCCTATCTTGGTGGATGTATTGAATTGGACTGATTCCCCGAAATGCCAAGAAAATGTGTCATACATTTTGATGGTCATGGCGCACAAATCCTATGGTGACAGGCAGGCCATGATTGAGGCTGGGATCGCTTCATCGTTGCTCGAATTGTCCCTTTTGGGTACCACATTGGCCCAGAAAAGGGCGTCGAGGATATTGGAGTGTTTGAGGGTAGACAAAGGGAAGCAGGTTTCCGGGAGCTTCGCTGGAAACTTAGGTGGAAATGTATCAGCCCCGATTTATGGCTCTTTGGCATCTTGCACAAAAAGAGATGGAGAAGCGGCAGAGTGTTTGGAGGAGGAGGAAGATATGATGAGTGAGGAGAAGAAAGCAGTGAAGCAGTTAGTCCAACAGAGTTTGCAAAACAACATGAAGAAGATTGTAAAGCGGGCCAATTTGCCTCAAGATATTGTTCCGTCTGATCATTTTAAGTCACTCACTTCAAGTTCAACTTCAAAGAGCCTGCCGTTTTGA 1446 0.4716 MSNNNNLGSLLLRHHHHHSKSATTLRLCHSSFRRIIFDSITCGSISRRHNTTPPLSEEDDDSQDEKSVKPDTRLSEKLSDLLNMEETEAKEEALEELKKVVKELQKQEEDTRRRVAAAAMVRKVAKEDVEVRETLAMLGVIPPIVAMLDSEDVHSQIASLYALLNLGIGNDANKAAIVKVGAVQKMLKLIELPGGPNSLVSEAIVANFLGLSALDSNKPIIGSSTAISFLVRTLQSLDDKTSPQSKQDALRALYNISIFPGNVSCILETNLVHFLVNSIGDMELTERTLSILSNLVSTREGRKAISAVPDAFPILVDVLNWTDSPKCQENVSYILMVMAHKSYGDRQAMIEAGIASSLLELSLLGTTLAQKRASRILECLRVDKGKQVSGSFAGNLGGNVSAPIYGSLASCTKRDGEAAECLEEEEDMMSEEKKAVKQLVQQSLQNNMKKIVKRANLPQDIVPSDHFKSLTSSSTSKSLPF 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0032 481 Coils Coil 83 114 - -
Lal10g0032 481 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 4 481 - -
Lal10g0032 481 MobiDBLite consensus disorder prediction 46 74 - -
Lal10g0032 481 MobiDBLite consensus disorder prediction 52 74 - -
Lal10g0032 481 Coils Coil 419 442 - -
Lal10g0032 481 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 4 481 - -
Lal10g0032 481 SMART arm_5 170 213 IPR000225 GO:0005515
Lal10g0032 481 SMART arm_5 128 168 IPR000225 GO:0005515
Lal10g0032 481 SMART arm_5 259 297 IPR000225 GO:0005515
Lal10g0032 481 SMART arm_5 214 258 IPR000225 GO:0005515
Lal10g0032 481 SUPERFAMILY ARM repeat 91 383 IPR016024 -
Lal10g0032 481 Gene3D - 89 226 IPR011989 -
Lal10g0032 481 Gene3D - 236 391 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0032 Lal-Chr10 355262 359727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0032 69 381 U-box Gene Family AT2G23140 30.573 8.59e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0032 - - gmx:100808483 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0032 10 355262 359727 Lal17g0207 17 1255871 1258907 PCT
Lal10g0032 10 355262 359727 Lal21g0310 21 2055533 2057770 PCT
Lal17g0207 17 1255871 1258907 Lal10g0032 10 355262 359727 PCT
Lal21g0310 21 2055533 2057770 Lal10g0032 10 355262 359727 PCT