Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0010 ATTGAGAAAATGAAGAAAGAAAATATAAAAGTTGTTGATGGGAATGGTGAAGAAGAACATGTTATGAGAATGACTAGAGCAAGGGCTAGAATCATCATGGGAGGGGTATCTGCTTCTTCAAAACCACCCTTTAAGAAGAAGGAACCAAACTCTAAGAGAGATACTACTTCTGCACTCACTGATGTAACTAACCTCCATTCAACTTCTAACTTCAATAGGCCATCAACTTTTCAGGCAAGAGGAGGATACAAGAAGAAAAACACAAATCTAGCTCCAGATGTCTCCAAACAAGAGGAAAAGTTAGCTGAAGATTCATCCACAATAGCAGATCCCCTGCTTTCATTAGATCAACCAATGACCCCTCTCCAAATCAAGCGTGAAAGGAGAGTGTCAAGCGATTACATGGACAAGTTACAGCACGATATCACCCCAGGCATGCGAGGAATTCTTGTTGATTGGCTTGTGGAGGTTAGTCCCATAGCAGTTGCTGAGGAATATAACTTAGTTCCAGACACTCTTTACCTTACAGTGAATCTCATTGATCGATTTCTTTCTGCTAGTTTGATTCAGAGACAAAGGCTGCAGCTGCTTGGTGTTACTTGCATGCTGATTTCATCAAAGTATGAGGAGATGAAAGCTCCACAAGTAAAAGAATTTTGCGTCATCACAGACAATGCATACACGAAAGCAGAGGTTGTGAAAATGGAGAAGGAAGTTCTAAAGCTTCTTCATTTTCAATTATCTATTCCTACAACCAAAACATTTCTAAGGAGATTCATCCAAGCAGCACAATCTTCTTACAAGGTTCCTTATGTTGAACTGGAATTCCTAGCAAATTATTTAGCAGAGCTTACTCTTGTTGAATACAGCTTCTTGCAGTTTCTACCTTCCATGATAGCTGCATCTGCTGTTTTACTTGCCAGATGGACCCTCATCCACTCTGAACATCCATGGAATCCAACTATGGAGCACTATACAAATTACAAAGTGTCACAGCTTAAAACTACTGTCCTTGCACTTGCAGATTTGCAACTTAATACTAACGCCTCTTCTCTGAATGCTGTGCGTGAAAAATATAAGCAACAAAAGGTTAGGCTTATGAGTAACTCTTGTTCTTTATTATGTTGGTATAATAAGTTTTAA 1143 0.392 IEKMKKENIKVVDGNGEEEHVMRMTRARARIIMGGVSASSKPPFKKKEPNSKRDTTSALTDVTNLHSTSNFNRPSTFQARGGYKKKNTNLAPDVSKQEEKLAEDSSTIADPLLSLDQPMTPLQIKRERRVSSDYMDKLQHDITPGMRGILVDWLVEVSPIAVAEEYNLVPDTLYLTVNLIDRFLSASLIQRQRLQLLGVTCMLISSKYEEMKAPQVKEFCVITDNAYTKAEVVKMEKEVLKLLHFQLSIPTTKTFLRRFIQAAQSSYKVPYVELEFLANYLAELTLVEYSFLQFLPSMIAASAVLLARWTLIHSEHPWNPTMEHYTNYKVSQLKTTVLALADLQLNTNASSLNAVREKYKQQKVRLMSNSCSLLCWYNKF 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0010 380 Gene3D - 125 368 - -
Lal10g0010 380 SMART Cyclin_C_2 250 373 IPR004367 -
Lal10g0010 380 Pfam Cyclin, C-terminal domain 250 370 IPR004367 -
Lal10g0010 380 PANTHER CYCLINS 127 368 IPR039361 -
Lal10g0010 380 SMART cyclin_7 254 342 IPR013763 -
Lal10g0010 380 SMART cyclin_7 152 241 IPR013763 -
Lal10g0010 380 Pfam Cyclin, N-terminal domain 127 248 IPR006671 -
Lal10g0010 380 PIRSF Cyclin_A_B_D_E 3 111 IPR039361 -
Lal10g0010 380 PIRSF Cyclin_A_B_D_E 122 374 IPR039361 -
Lal10g0010 380 CDD CYCLIN 248 340 IPR013763 -
Lal10g0010 380 MobiDBLite consensus disorder prediction 55 83 - -
Lal10g0010 380 SUPERFAMILY Cyclin-like 120 247 IPR036915 -
Lal10g0010 380 SUPERFAMILY Cyclin-like 249 365 IPR036915 -
Lal10g0010 380 Gene3D - 130 248 - -
Lal10g0010 380 MobiDBLite consensus disorder prediction 35 99 - -
Lal10g0010 380 CDD CYCLIN 146 240 IPR013763 -
Lal10g0010 380 PANTHER CYCLIN-A2-4 127 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0010 Lal-Chr10 104479 107447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0010 5 365 Core Cell Cycle Gene Families AT5G25380 48.131 8.01e-118 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0010 K06627 - gmx:100777132 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0010 10 104479 107447 Lal17g0251 17 1561795 1567756 PCT
Lal10g0010 10 104479 107447 Lal4g0234 4 1475496 1481394 PCT
Lal17g0251 17 1561795 1567756 Lal10g0010 10 104479 107447 PCT
Lal4g0234 4 1475496 1481394 Lal10g0010 10 104479 107447 PCT