Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2346 ATGTCCAACTCTGATGGAGCCACTAACGCCGTCCCTCCCAACGACGCCAACAACAACACAATCGTTGAGTACCAGCAGCGAACCACCACCACCACCACCGCCGCCGCCGCCGCCCTCGCCGTCAAGAAACCGCCTTCCAAGGACCGCCACAGCAAGGTCGACGGCCGCGGGCGCCGCATTCGCATGCCGATCATCTGCGCCGCCCGCGTCTTCCAGCTCACGCGCGAGCTCGGCCACAAGTCCGACGGCCAGACCATCGAGTGGCTCCTCCGCCAGGCGGAACCCTCCATCATCGCCGCTACCGGCTCCGGCACCACTCCGGCGAGCTTCTCCACTGTCTCCGACCACAAGCCCCTCCTCCCTCCCCCTACCCCCTTCATCCTCGGCAAACGCATTCGCCCTGACGACGACTCCGCCGCCAAAGACGACGCCGTCTCGCTCGTCGCCCCCCCCACGCCGCCCGCCCTCTGGGCCCTACCTCCCCGCCCCGACTTCGGCCAGGTCTGGAGCTTCGCCGCCGCGCCCGAACTCGTGTCGGTGTCGCCGCAGAATTCAATGTTTCACCATCACCATCAACACCACCAGCAGCAACAGCAACAGGCCGCCATGGGAGAGGCCTCTGCCGCAAGGCTCGGGAATTACCTCCCCGGCCACCTCAATTTGCTCGCCTCGTTGTCCGGCGGCCACGGGAATTCCGGCCGGCGGGACGACGAGCCTCGCTGA 723 0.6722 MSNSDGATNAVPPNDANNNTIVEYQQRTTTTTTAAAAALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGSGTTPASFSTVSDHKPLLPPPTPFILGKRIRPDDDSAAKDDAVSLVAPPTPPALWALPPRPDFGQVWSFAAAPELVSVSPQNSMFHHHHQHHQQQQQQAAMGEASAARLGNYLPGHLNLLASLSGGHGNSGRRDDEPR* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2346 240 ProSiteProfiles TCP domain profile. 46 100 IPR017887 -
Gso9g2346 240 Pfam TCP family transcription factor 46 117 IPR017887 -
Gso9g2346 240 MobiDBLite consensus disorder prediction 185 206 - -
Gso9g2346 240 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 237 IPR005333 GO:0003700
Gso9g2346 240 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 237 - -
Gso9g2346 240 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2346 Gso-Chr9 47798400 47800347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2346 38 240 TCP Transcription Factor Family AT5G23280 65.066 1.00e-88 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gso9g2346 TCP 2.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2346 K16221 - gmx:100786264 420.624