Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2344 ATGACTTTGTTGAAGTTCCATGAAGTGTGGAAGCCAGTTTTGGTGATGATTATAGTTAATTTAGCTCTGGCTTTTGTCAATATATTTCTGAAGAAGGTTCTTAATGAAGGAGTGGACTACTTGACCATCCTAACATATCGACAAGCAATTTCAGCCATTTTCTTGACACCTATTGCTTGTTTCTATGAAAGGAAAAGGAAGCTGGAGGGTCACATAATATGTCTGCTTTTCCTAAGTGCTGTTGTGGGGGTAACACTCACTCAATACCTGTACCTTATTGGACTAGAATATACATCTGCCACGTTCGCATGTGCATTCCTAAATATGGTGCCTGTATTCACCTTTATTATGGCGCTGCCACTGGGGATAGAGAAAGTGAACATGAAAAAGCTGAGTGCTAAGGCCAAGGTGTTGGGAACTTTTGTGTGTATTGGTGGAGCTTTGATGTTGATCCTTTATAAAGGAGTGCCCTTAATCAACCAACAACCAGAGCACATAGCAGACAAAGGCACAATAAGATCATCAGCCTCCAAGTTAAAGAAATGGATCATAGGTTCACTGCTTCTAACTGCAGGATGCTTCTTGTGGTCTTCATGGTTTCTTATACAAGCAAGCATTAGCAAAAAGTATCCATGTCAATACTCTAGCACTGCCATTTTGTCCTTTTTTGCTTCCATTCAATCAGCAATATTGACTTTGGTCATCGATAGAAGTAACGCCAAATGGATTCTCAAAGGAAAGTTAGAGATAATGACTGTTGTATATGCTGGGCTGGTAGGATCAGGCTTGTGCTATGTGGCAATGTCATGGTGTGTGAAACAAAGGGGTCCAGTTTTTACTTCAGCATTTACCCCTCTTCTACAGATGTTCGTGGCTGTGCTTGATTTCTCTATATTACATGAGGAAATTTATCTTGGAAGTGTTGCAGGATCAGTCTTGGTTATATCTGGCACGTATATTCTACTTTGGGGTAAAAGTAAAGAGGAAGAACAATGTGCCGTGAAGGGTACTCAAGAAAGTCAAGAAGATGAAGAATGTAAGAATAATTTGGAGGCCAGTTCAAATGTACCTTCTAAGCTAAGGCCTAATGAGGAACAAGGATTCTCTGAATTACAAGTGAAGCAGCTAGCTATTACAGTAACTAGAAGTTGA 1152 0.4002 MTLLKFHEVWKPVLVMIIVNLALAFVNIFLKKVLNEGVDYLTILTYRQAISAIFLTPIACFYERKRKLEGHIICLLFLSAVVGVTLTQYLYLIGLEYTSATFACAFLNMVPVFTFIMALPLGIEKVNMKKLSAKAKVLGTFVCIGGALMLILYKGVPLINQQPEHIADKGTIRSSASKLKKWIIGSLLLTAGCFLWSSWFLIQASISKKYPCQYSSTAILSFFASIQSAILTLVIDRSNAKWILKGKLEIMTVVYAGLVGSGLCYVAMSWCVKQRGPVFTSAFTPLLQMFVAVLDFSILHEEIYLGSVAGSVLVISGTYILLWGKSKEEEQCAVKGTQESQEDEECKNNLEASSNVPSKLRPNEEQGFSELQVKQLAITVTRS* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2344 383 PANTHER WAT1-RELATED PROTEIN 10 349 - -
Gso9g2344 383 PANTHER WAT1-RELATED PROTEIN 10 349 IPR030184 GO:0016021|GO:0022857
Gso9g2344 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Gso9g2344 383 MobiDBLite consensus disorder prediction 334 349 - -
Gso9g2344 383 MobiDBLite consensus disorder prediction 334 365 - -
Gso9g2344 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 327 - -
Gso9g2344 383 Pfam EamA-like transporter family 11 151 IPR000620 GO:0016020|GO:0016021
Gso9g2344 383 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2344 Gso-Chr9 47778981 47784800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2344 1 330 Nodulin-like Gene Family AT1G11460 40.841 1.77e-83 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2344 - - gmx:100794199 750.355