Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2325 ATGATGAGTTCCAAAGAAAATGAGGAGGATGACACTTACCTCTCAGCTTTGACACTATGTTTCAGCCGAATTTTTCCGGCAATCTTGAACGCTGCTGTTGATCTGAATTTGTTTGATATCATAGACAAGGCAGAGAGTTCAACTTTGTCAGCCTCTGAGATTGCTTCTTTGCTTCCAAATCCACACCCTCAATTGGCTAATAGGCTTGAACGCATATTGCCGGTGTTGGCAAGTTACTCTCTTCTCAATTGCTCCATTCGCACCACTGAAGATGGTGTGAGAGAGAGACTCTATGCTCTCTCACCAATTGGTCAATACTTTGCCTCTGACGACGATGGAGGCTCTTTGGGTCCTCTCTCAAGCTTATTTCATCGTGGATATTTTCACGTCTTGAAGGATGTAAAGGATGCAATTGTGGACCCTAACAACAATAACCATTTTGAAAATGTGCATGGAATACCACCATATGATTATATGGAGAAAAATGCTGAGCTGAATGACATTTTTTACAAAGCAGTAATTCACGCTGCCCCACTAGAATTGAAAAGGGCACTCAAACTATACAAAGGATTTGAGGGAGTGTCAACACTTGTTGATGTAGGAGGTGGAGCTGGAGAGACCCTGAAACAGATTCTCCCAAAATATCCTTCAATGAAAGGAATTAATTTTGATTTGCCTCTGGTGATTCAAAAAGCACCACCTCACCCAGGTATAGAGCAAATTGCAGGAGATATGTTTGAAAGTGTTCCAACTGGTGATGCCATTTTAGTGAAGTTTGTATGTCACAATTGGGCTGATGAAGATTGTATAAAGTTTTTAAGAAACTTTCACAAAGCCTTGCCACAACATGGAAAAGTGATTGTTTTCGAATATATAATACCAGAAGTCCCGAATCCAAGCTATATATCCAAGCATACTTGTACTCTCGACAATGTCATGTTTTTAGCACATGGTGGAAGGGAAAGAACTCAGAAGGAATTTGAGAACTTGTGCAAGAGCTCTGGTTTTTCCAAGTTTCATGTAGCAAGTAGTGACATCTCATCTACGTTAGGAGTAATGGAATTCTATAAGTAG 1074 0.4032 MMSSKENEEDDTYLSALTLCFSRIFPAILNAAVDLNLFDIIDKAESSTLSASEIASLLPNPHPQLANRLERILPVLASYSLLNCSIRTTEDGVRERLYALSPIGQYFASDDDGGSLGPLSSLFHRGYFHVLKDVKDAIVDPNNNNHFENVHGIPPYDYMEKNAELNDIFYKAVIHAAPLELKRALKLYKGFEGVSTLVDVGGGAGETLKQILPKYPSMKGINFDLPLVIQKAPPHPGIEQIAGDMFESVPTGDAILVKFVCHNWADEDCIKFLRNFHKALPQHGKVIVFEYIIPEVPNPSYISKHTCTLDNVMFLAHGGRERTQKEFENLCKSSGFSKFHVASSDISSTLGVMEFYK* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2325 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 343 IPR029063 -
Gso9g2325 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Gso9g2325 357 Gene3D Vaccinia Virus protein VP39 112 357 IPR029063 -
Gso9g2325 357 CDD AdoMet_MTases 196 293 - -
Gso9g2325 357 Pfam Dimerisation domain 28 77 IPR012967 GO:0046983
Gso9g2325 357 Pfam O-methyltransferase domain 133 337 IPR001077 GO:0008171
Gso9g2325 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 357 IPR016461 GO:0008168
Gso9g2325 357 PANTHER O-METHYLTRANSFERASE 10 357 IPR016461 GO:0008168
Gso9g2325 357 Gene3D - 1 107 IPR036388 -
Gso9g2325 357 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 10 357 - -
Gso9g2325 357 SUPERFAMILY "Winged helix" DNA-binding domain 8 112 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2325 Gso-Chr9 47581835 47591746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2325 9 341 Monolignol Biosynthesis Gene Families AT5G54160 44.282 5.47e-96 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2325 - - gmx:106794104 645.58