Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2323 ATGTCTGGCGTGCCATTACCCTCAAACCTTCTGCCTGGTGATGGAAGCCCTGAATGGTTTAGCAGAGCAGACAATGCATGGCAGCTAATAGCTGCAACCCTAGTTGGTCTCCAAAGTGTTCCAGGGCTCATAATCTTGTACGGTGGAGCAGTGAAGAAGAAATGGGCAGTGAACTCAGCATTCATGTCACTCTATGCTTTTGCATGTGTGTTTTTCTGTTGGGTTGTGTGGGGATACAGAATGTCTTTTGGTGATGAGCTTCTTCCTTTCTGGGGAAAGCCTGCTATGTCACTTGAACATGCTTACCTTTTCAAGAGGGCCTTTTTGGGGGCATTCCCAAATGCCACAATGGTGTATTTCCAGTGTGTCTTTGCTGCCATCACTTTGATTCTCATTGCTGGGGCTGTGTTGGGGCGCATGAACTTCTATGCTTGGATGTTGTTTGTGCCTTTGTGGCTCACTTTCTCATACACCTTCACAGCTTTCAGCATATGGAGTTCTAGTGGGTTTTTGACCAAAATGGGGATAATAGACTACTCAGGTGGATATGTGATCCATTTGTCTTCCGGGGTTGCAGGATTCACGGCTGCATATTGGGTTGGGCCACGGCTAAACAAGGACAGGGAAAGGTTCCCTCCAAACAACATTCTTCTGATGCTGGCAGGGGCAGGGCTGCTGTGGATGGGGTGGACGGGCTTCAACGGAGGAGATCCATACACAGTAAACTCGGATGCTTCCCTTGCCGTCCTCAACACCCATGCTTGCACTGCTACCAGCTTGCTCACTTGGGTCATCCTTGATGTCCTCTTTTTCCGAAAGCCTTCTGTCATTGGAGCTGTTCAAGGCATGATCACTGGCTTGGTTTGCATAACCCCTGCTGCAGGTGTTGTGGAGGGATGGGCAGCACTTATAATGGGAGTGTTATCTGGCTCAATTCCATGGTTCACCATGATGGTGGTCCATAAGAGATCAAAGCTACTGCAGAAGGTTGATGATACAATGGCAGTGTTCCACACTCATGCCATTGCAGGAACCCTAGGAGGACTCCTCACTGGACTCTTTGCTGATCCAAGACTTAACAAATTGTTCTATGGAACTGATGGTCAATACGTTGGTTTCTTTTATGGTTTAGGTTCGAAGAAGGTCAGTACCGGGTTCAGGCAAATGGGGGTCCAAATCCTTGGGATTATCTTTGTTATCTTTGTCAATGTTATCAGCACAAGTTTGATTTGCCTCTTCATTAGAATTTTTGTTCCGTTGAGAATGTCTGAAGAGGATATGGAGATAGGTGATGAGGCTGCTCATGGGGAAGAAGCTTATGCAATCTGGGGTCAGGGTGATAAGCTTGAAAACTCAAGTTCTAAGTATGGAAGTTCATTATATGATGATGTTGAAGCTGGTGGCCCCAAGAAGAAGCGTGGCGGCACGGTTGAGATGATGTCGAACTAA 1449 0.4707 MSGVPLPSNLLPGDGSPEWFSRADNAWQLIAATLVGLQSVPGLIILYGGAVKKKWAVNSAFMSLYAFACVFFCWVVWGYRMSFGDELLPFWGKPAMSLEHAYLFKRAFLGAFPNATMVYFQCVFAAITLILIAGAVLGRMNFYAWMLFVPLWLTFSYTFTAFSIWSSSGFLTKMGIIDYSGGYVIHLSSGVAGFTAAYWVGPRLNKDRERFPPNNILLMLAGAGLLWMGWTGFNGGDPYTVNSDASLAVLNTHACTATSLLTWVILDVLFFRKPSVIGAVQGMITGLVCITPAAGVVEGWAALIMGVLSGSIPWFTMMVVHKRSKLLQKVDDTMAVFHTHAIAGTLGGLLTGLFADPRLNKLFYGTDGQYVGFFYGLGSKKVSTGFRQMGVQILGIIFVIFVNVISTSLICLFIRIFVPLRMSEEDMEIGDEAAHGEEAYAIWGQGDKLENSSSKYGSSLYDDVEAGGPKKKRGGTVEMMSN* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2323 482 SUPERFAMILY Ammonium transporter 19 422 - -
Gso9g2323 482 Pfam Ammonium Transporter Family 26 440 IPR024041 GO:0008519|GO:0016020|GO:0072488
Gso9g2323 482 Gene3D Ammonium transporter AmtB like domains 13 444 IPR029020 -
Gso9g2323 482 TIGRFAM amt: ammonium transporter 24 440 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gso9g2323 482 MobiDBLite consensus disorder prediction 454 482 - -
Gso9g2323 482 ProSitePatterns Ammonium transporters signature. 178 203 IPR018047 GO:0008519|GO:0016020|GO:0072488
Gso9g2323 482 PANTHER AMMONIUM TRANSPORTER 4 480 - -
Gso9g2323 482 PANTHER AMMONIUM TRANSPORTER MEP2 4 480 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gso9g2323 482 PRINTS Rhesus blood group protein signature 121 137 IPR002229 GO:0005887
Gso9g2323 482 PRINTS Rhesus blood group protein signature 217 235 IPR002229 GO:0005887
Gso9g2323 482 PRINTS Rhesus blood group protein signature 248 270 IPR002229 GO:0005887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2323 Gso-Chr9 47538956 47541843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2323 115 474 Inorganic Solute Cotransporters AT2G38290 61.111 2.76e-145 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2323 K03320 - gmx:100787856 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1652 18 48417660 48422455 Gso9g2323 9 47538956 47541843 GST