Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2317 ATGGGAGGCTGTTGCAGCCACGATGTTTCGGTTCGAGGGAAGGTGGAGAGCGAGATGGATGATAGAGAATATGAGTATGATTATGAAAATGATGTGTCTTATCAACAAGGTGGAGCATTGGTCAGGTTAAGAGGTTCCTCTAGGTTTGCATCAATGTACTCCCAACAAGGCCAGAAAGGTGTGAACCAAGATGCAATGACAGTTTGGGAGGACTATACTGGAGAAAAAGATGTGATCTTTTGTGGTGTGTTCGATGGTCATGGTCCTCTAGGCCACAAGGTTTCACAATTTATTCGAGACAATCTACCCTCAAAACTGTCTGCAGCAATAGAAATTTCACAACAGAAGACAATCAAATACTATGATGCCAATGATGCAGAAACTGGTAGCTTTGATGATGCCTACGATGACAATAACCACAACATGTCCCTTGCTTCATGGGAGGGATGCTTGCTGAAATCCTTTGATGAGATGGATGAGTACCTTGCTCAGGAAATTAACACTGACAGCTATTGCAGTGGTTGCACAGCTGTGACATTAATTAAACAGGGTGACCAGTTGATAGTTGGCAATTTGGGCGATTCTCGTGCAGTACTTTGCACAAGGGATAGGGACCAACTCATTCCTGTTCAACTCACTGTTGACTTGAAACCGGATATTCCAAGTGAAACCTCAAGAATAGTTAACTGTGAAGGAAGAGTTTTTGCAGCAGAAGAAGAACCAGATGTGTACAGAATATGGATGCCTGATGATGACTGCCCTGGACTAGCCATGTCAAGAGCCTTTGGGGACTTTTGCCTCAAAGATTATGGCCTCATCTCAGTTCCTGATGTGTTCTACAGAAAAATTACCCCTCAAGATGAATTTGTGGTTTTAGCAACTGATGGGGTGTGGGATGTGCTCACTAACAGTGAAGTGATAAACATAGTAGCTTCAGCACCAAGGAGGTCCATTGCAGCCAAGTTGTTAGTGAAGCGTGCTGTTAGAGCCTGGAGATACAAGTATCCTGGTTCCAAGGTTGATGACTGTGCTGTCATATGCTTGTTTCTGGATGCACAATCTGCTCTATCACACTCACAATCCTACAGTAATAGAAAGAGTAGACAGCGCAGCAAGCACTTGAATCGCACTAAGTCCACTAGAAATGAAGACAATGAAACTGTATATGGCAAGGTTGGGGTGGAGCTAGATGAAGAATGGAAGGCCCTTGGAGGGTTTGCAAGAGCCAACTCTTTATCAAAACTTCCACGCCTTGCTAGGGGTATGAGTAAACGGCAATCATCTAAATACTATATACCAAGTTGA 1305 0.4368 MGGCCSHDVSVRGKVESEMDDREYEYDYENDVSYQQGGALVRLRGSSRFASMYSQQGQKGVNQDAMTVWEDYTGEKDVIFCGVFDGHGPLGHKVSQFIRDNLPSKLSAAIEISQQKTIKYYDANDAETGSFDDAYDDNNHNMSLASWEGCLLKSFDEMDEYLAQEINTDSYCSGCTAVTLIKQGDQLIVGNLGDSRAVLCTRDRDQLIPVQLTVDLKPDIPSETSRIVNCEGRVFAAEEEPDVYRIWMPDDDCPGLAMSRAFGDFCLKDYGLISVPDVFYRKITPQDEFVVLATDGVWDVLTNSEVINIVASAPRRSIAAKLLVKRAVRAWRYKYPGSKVDDCAVICLFLDAQSALSHSQSYSNRKSRQRSKHLNRTKSTRNEDNETVYGKVGVELDEEWKALGGFARANSLSKLPRLARGMSKRQSSKYYIPS* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2317 434 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 410 - -
Gso9g2317 434 Gene3D - 44 352 IPR036457 -
Gso9g2317 434 ProSiteProfiles PPM-type phosphatase domain profile. 49 350 IPR001932 -
Gso9g2317 434 PANTHER ALPHABET, ISOFORM E-RELATED 1 410 - -
Gso9g2317 434 CDD PP2Cc 48 350 IPR001932 -
Gso9g2317 434 Pfam Protein phosphatase 2C 73 327 IPR001932 -
Gso9g2317 434 SUPERFAMILY PP2C-like 47 351 IPR036457 -
Gso9g2317 434 SMART PP2C_4 38 348 IPR001932 -
Gso9g2317 434 MobiDBLite consensus disorder prediction 360 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2317 Gso-Chr9 47439740 47443792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2317 1 390 PP2C-type Phosphatase Gene Family AT5G01700 50.000 6.72e-134 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2317 - - gmx:100783603 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1680 18 48906085 48910053 Gso9g2317 9 47439740 47443792 GST
Gso9g2317 9 47439740 47443792 Gso1g1086 1 44428513 44431226 PCT
Gso1g1086 1 44428513 44431226 Gso9g2317 9 47439740 47443792 PCT