Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2305 ATGACCAATATAGTAGCCATTATCAGTTTTTCTCTCATCTTGATTGTGGTACTGATGAAAATAGTGAGGAATCATAAGAAAACAAAACCAACTCCAAATGTACCTCCAGGGCCATGGAAGCTACCTGTTATAGGAAATGTACACCAAATTATTACATCCGCACCACATAGAAAATTGAGAGACCTAGCCAAAATCTATGGACCTTTGATGCATCTCCAACTTGGAGAAGTCACCACAATTATTGTTTCCTCACCCGAGTGTGCTAAAGAGATAATGAAAACTCATGATGTGATCTTTGCATCAAGGCCTCGTGGTGTAGTTACAAACATATTGTCTTATGAATCCACAGGTGTTGCTTCTGCACCTTTTGGAAATTATTGGAGAGTGCTACGAAAGATGTGCACCATAGAGCTTTTGTCCCAAAAACGTGTCGATTCATTCCAGCCAATAAGAGAAGAAGAACTCACTACTCTCATCAAAATGTTTGATTCTCAAAAAGGGTCACCCATCAACCTCACTCAAGTAGTACTTTCATCAATATATTCTATCATTTCAAGAGCTGCTTTTGGCAAGAAATGCAAAGGCCAAGAAGAATTCATATCATTGGTGAAAGAAGGACTCACAATATTGGGTGATTTTTTTCCTTCTAGTAGATGGCTTCTACTTGTCACCGATTTGAGGCCTCAGCTTGATAGATTGCATGCACAAGTTGATCAGATTCTAGAAAACATCATCATTGAACATAAAGAGGCAAAGTCAAAAGTAAGAGAAGGCCAAGATGAAGAAAAGGAAGATTTGGTAGACATTCTCCTAAAACTTCAGGATGGTGACGATAGTAACAAGGATTTTTTCTTAACTAATGACAATATCAAGGCTACAATCTTGGAAATCTTTAGTGCTGGGGGTGAGCCATCAGCAATTACCATAGATTGGGCAATGTCTGAGATGGCAAGGGATCCAAGAGTGATGAAGAAAGCACAAGATGAAGTGAGAATGGTATTCAATATGAAGGGAAGGGTTGATGAAACATGCATCAATGAACTCAAATATTTGAAATCAGTTGTGAAAGAAACCCTAAGATTACACCCTCCAGGTCCTCTTTTACTTCCAAGAGAATCAACACAAGAATGTAAGATTCATGGGTATGACATACCCATCAAAAGCAAGGTAATAGTTAATGCCTGGGCAATTGGAAGAGATCCAAACTATTGGAATGAACCAGAGAGGTTTTATCCAGAAAGATTCATTGATATCTCTATTGACTATAAAGGGAATAATTTTGAGTACATTCCATTTGGTGCTGGAAGAAGAATATGCCCTGGCAGCACATTTGGTTTGGTAAATGTTGAGATGGCACTTGCATTGTTCTTGTATCACTTTGATTGGAAGCTCCCCAATGGAATACAAAATGAAGACTTGGACATGACTGAGGAATTTAAAGTGACTATTAGAAGAAAAAATGACCTGTGCTTGATTCCTGTATCTCCTCCTTGTTCTGTGGTTGCAATGTATAGCTCATAA 1521 0.3833 MTNIVAIISFSLILIVVLMKIVRNHKKTKPTPNVPPGPWKLPVIGNVHQIITSAPHRKLRDLAKIYGPLMHLQLGEVTTIIVSSPECAKEIMKTHDVIFASRPRGVVTNILSYESTGVASAPFGNYWRVLRKMCTIELLSQKRVDSFQPIREEELTTLIKMFDSQKGSPINLTQVVLSSIYSIISRAAFGKKCKGQEEFISLVKEGLTILGDFFPSSRWLLLVTDLRPQLDRLHAQVDQILENIIIEHKEAKSKVREGQDEEKEDLVDILLKLQDGDDSNKDFFLTNDNIKATILEIFSAGGEPSAITIDWAMSEMARDPRVMKKAQDEVRMVFNMKGRVDETCINELKYLKSVVKETLRLHPPGPLLLPRESTQECKIHGYDIPIKSKVIVNAWAIGRDPNYWNEPERFYPERFIDISIDYKGNNFEYIPFGAGRRICPGSTFGLVNVEMALALFLYHFDWKLPNGIQNEDLDMTEEFKVTIRRKNDLCLIPVSPPCSVVAMYSS* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2305 506 Pfam Cytochrome P450 35 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g2305 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Gso9g2305 506 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g2305 506 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g2305 506 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g2305 506 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g2305 506 Coils Coil 241 261 - -
Gso9g2305 506 Gene3D Cytochrome P450 27 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g2305 506 SUPERFAMILY Cytochrome P450 35 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g2305 506 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g2305 506 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g2305 506 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g2305 506 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g2305 506 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g2305 506 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g2305 506 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g2305 506 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g2305 506 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso9g2305 506 PANTHER CYTOCHROME P450 71B11-RELATED 8 495 - -
Gso9g2305 506 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2305 Gso-Chr9 47307340 47309830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2305 1 494 Cytochrome P450 AT3G26300 42.490 2.41e-136 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2305 - - gmx:100818520 978.393