Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2296 ATGGCTGCTTCTAGGGAGAAAAGAAGAGCATCTCTGGAAGAAACGTTGCAACAACTTCGCGATGTCACAAACTCCACTGCTTTGAACAAAGCCTCAATTATTGTAGACGCCTCAAAATACATAGAGGAGTTGAAACAAAAAGTGGAGGGACTGAACTCAGAGCTGGAAATCGCGGAATCATCAACAACCACTCAAATTGATGAACTACCTATGGTAATTGTGAAAACCCTAAAAAAGGGTTTCCTGATTAATGTGCTTTTAGAAAAGAATTGCCCTGGAATGCTCGTCTCTATACTCGAAGCCTTCGAAGAACTTGGCCTTGATGTGCTTGATGCTAGGGTTTCTTGTGAAGACAGTTTCCAGCTAGAAGCTGTGGGAAGAGAAAGTCACAAGAACGACAGTGTTGACGCGCAAGTGGTAAAGCAAGCAGTGTTGCAAGCAATCAAGAACGCGGACTAA 459 0.4336 MAASREKRRASLEETLQQLRDVTNSTALNKASIIVDASKYIEELKQKVEGLNSELEIAESSTTTQIDELPMVIVKTLKKGFLINVLLEKNCPGMLVSILEAFEELGLDVLDARVSCEDSFQLEAVGRESHKNDSVDAQVVKQAVLQAIKNAD* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2296 152 ProSiteProfiles ACT domain profile. 83 152 IPR002912 -
Gso9g2296 152 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 7 59 IPR036638 GO:0046983
Gso9g2296 152 Coils Coil 34 61 - -
Gso9g2296 152 Gene3D - 3 69 IPR036638 GO:0046983
Gso9g2296 152 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 151 - -
Gso9g2296 152 CDD ACT_UUR-ACR-like 92 148 - -
Gso9g2296 152 Coils Coil 2 22 - -
Gso9g2296 152 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 2 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2296 Gso-Chr9 47210984 47212947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2296 4 128 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 27.389 9.72e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2296 - - gmx:100527466 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1701 18 49322911 49324585 Gso9g2296 9 47210984 47212947 GST