Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2283 ATGACCGTTACAACAGAATTCGCAGCAGCGACAAACGACGAGGAGGTGCCATCCGGCGTCGTTTTGTTCGGGAAGTATGAGTTAAGGCGGTTGCTGGGAGCTGGCGCATTCGCCAAGGTGTACCACGCGACGAGCGTGGACGACACGCGCCAGAGCGTGGCGGTGAAGGCCGTGAGCAAAAACAAGGTCCTGAACGGAGGCTTCGCTGCCAACGTGGAGCGCGAGATCTCCATCATGCGCCGCCTGCACCACCCCAACATCATTAACCTCTTCGAAGTACTCGCGACCAAAACAAAAATCTACTTCGTCATGGAGTTCGCCGCCGGCGGGGAGCTCTTCCACGAGGTCGCAGGCAAGGTGCGGCTCACGGAGGAAACCGCCAGATTTTACTTCCGGCAACTCATCTCCGCCGTCAAGCACTGCCACTCGCGCGGCGTTTTCCACCGCGACCTCAAGCTCGACAACCTCTTGCTCGACGAGAACGGGAACCTTAAGGTCTCCGATTTCGGGTTGAGTGCGGTCACGGGTCAGATCCGACCCGACGGGCTGTTGCACACGGTCTGTGGGACCCCTACCTACGTGGCACCCGAGATTCTCGCGAAGAAAGGCTACGATGGCGCCAAGGTGGATCTTTGGTCGTGCGGCGTCGTTTTGTTCGCGCTCACCGCAGGCTATTTACCCTTCAATGATTACAATCCCACCGTTCTGTATAGGAAGATTTACCGCGGTCAATTCCGGTTCCCGAGGTGGATGTCGTATGATCTGAGGTTCCTCTTATCACGCCTCTTGGACACGAATCCCAGTACGAGGATAACCGTCGATGAGATCTATAAGAACACGTGGTTCAACGCGGGTGGTGGTGAGTATCGGTTCAACCGGGTTTCGGTCACGGAGAGTGAGTGTGAGAAGCAATTGGGTCGAACCGGGTTCGAGTCGTTGAATGCTTTTGACTTGATTTCTTTCTCAACCGGGCTTGATATGTCGGGTCTTTTTGAGGATCCGAATGGTTCAGATTCGGCTGAACGGATTGTTTCGTCAGTGGCGCCGGAGGAAATCATGGAGAGGGTGGAGGCAGTGGCGGAGGAGGGGAGGGTGGTGGTGAGAAGGGAGAAGAATGGCGGTGGAGCAAAGCTAGAAGGGCAGGATGGTAATTTGATTGGTATTGTTGTGGTTTACCGATTAACAGATGAGCTGGTAGTGGTTGAAATGAAGAGGGGTGAAAAAGGAGGGAAATGTGGTGTGCAGTTTTGGAAAGATAAATTGTGTCCTTTGCTTCTTGAATTGACAAGTGATTTGGAAGAGCCGGTATCCCGGTGA 1317 0.5437 MTVTTEFAAATNDEEVPSGVVLFGKYELRRLLGAGAFAKVYHATSVDDTRQSVAVKAVSKNKVLNGGFAANVEREISIMRRLHHPNIINLFEVLATKTKIYFVMEFAAGGELFHEVAGKVRLTEETARFYFRQLISAVKHCHSRGVFHRDLKLDNLLLDENGNLKVSDFGLSAVTGQIRPDGLLHTVCGTPTYVAPEILAKKGYDGAKVDLWSCGVVLFALTAGYLPFNDYNPTVLYRKIYRGQFRFPRWMSYDLRFLLSRLLDTNPSTRITVDEIYKNTWFNAGGGEYRFNRVSVTESECEKQLGRTGFESLNAFDLISFSTGLDMSGLFEDPNGSDSAERIVSSVAPEEIMERVEAVAEEGRVVVRREKNGGGAKLEGQDGNLIGIVVVYRLTDELVVVEMKRGEKGGKCGVQFWKDKLCPLLLELTSDLEEPVSR* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2283 438 ProSitePatterns Protein kinases ATP-binding region signature. 32 56 IPR017441 GO:0005524
Gso9g2283 438 CDD CIPK_C 314 425 - -
Gso9g2283 438 PANTHER - 7 436 - -
Gso9g2283 438 Gene3D Transferase(Phosphotransferase) domain 1 20 312 - -
Gso9g2283 438 Pfam NAF domain 311 368 IPR004041 GO:0007165
Gso9g2283 438 SUPERFAMILY Protein kinase-like (PK-like) 22 287 IPR011009 -
Gso9g2283 438 ProSiteProfiles Protein kinase domain profile. 26 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2283 438 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 7 436 - -
Gso9g2283 438 ProSiteProfiles NAF domain profile. 308 332 IPR018451 GO:0007165
Gso9g2283 438 Pfam Protein kinase domain 26 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2283 438 Gene3D Kinase associated domain 1, KA1 313 429 - -
Gso9g2283 438 SMART serkin_6 26 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2283 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2283 Gso-Chr9 47081103 47082833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2283 6 421 CBL-interacting serine-threonine protein kinases AT2G30360 56.872 2.09e-162 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso9g2283 Pkinase 3.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2283 - K12761 gmx:100810319 832.787