Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2282 ATGGGTAACTATAGGTTCAAATTATCAGATATAATCCCCAATGCCTGGTTTTACAAACTCAAGGACATGGGAAAAACAAGAAAGCAAACCCAAACAACTAATTCCAGGAAGAAAAAGCAACCTTCACCAGTCTCAACCACAAAACCATCAAAACCAAAGCAACCCCACCAATACAATCTCAGAAAGTCTTACTATTTCACTAGGGAGCTTACCCCAAATGATAGAATCTACTCCTCACCAACACCAACAAATAACCAAAATGCCAAAGACAACAATTCCCCTGAACCCCCCAGAAAATCATCCAAACAAAGACTGAAGAAAAGAACTTCAAGGACTTCTTCACCTAAGCTTCTTGTTGTCTCTAACAATAACAACTCCTCCTCATCACCACATGATAATAGCTCTACTGAATCTTCAGAGCACCCTGACCCAGAATTCAGAACAGACCGTGTTCTTCCAACCGAGTCATTCGATGAAACGGTTCCTTGGGCAAACTCTTGTGCCTGCAGGGTACACTCCAACACCAAGGACATCATCATTGATATTGACAACAATTCCATAGCCAGAAAAGATGATAAGCTAGAAGGATATGATTATGAATGTGATTCCTTCTCAGACCTTGTGCTTCCACCAATTGTGACAAAGCCTGCAAAATTCAATGACTTGCTCAGTGATGCCAAGAAGAAAGAAACCAAAACCAGAAGCAAGATGGCTGCACATGAAGAAGAACCAAACCTCAATAAGGGCCCTCTGAGGGTTAAAATTGTGAAGGAAGACACTGCATCAATGAAGGGACAGAAGAACAACTATGGAAGGAGATTCTCTGTGAGTTCTCCTGGAGTGAGGCTTCGGATGAATTCTCCGCGAATCGCCAGCCGGAGAGTTCAGGCAAACGGCCGGAGAAGCGTGTCCTCGGCCGCCGCCGCCGCCGCCGCCGCCGCCCGGAGAAGCCTCTCCGATAGCTTTGCAGTTGTGAAGTCATCACTGAATCCACAGAGGGATTTCAGAGAATCAATGGTGGAGATGATTGTGCAGAACAACATAAGGACATCAAAGGATTTGGAGGATCTTCTAGCTTGCTACCTTTCTTTGAATTCAGATGAGTATCATGATCTCATTATCAAAGTGTTCAAGCAAATATGGTTTGATTTAACTGATAACAATTAG 1167 0.4362 MGNYRFKLSDIIPNAWFYKLKDMGKTRKQTQTTNSRKKKQPSPVSTTKPSKPKQPHQYNLRKSYYFTRELTPNDRIYSSPTPTNNQNAKDNNSPEPPRKSSKQRLKKRTSRTSSPKLLVVSNNNNSSSSPHDNSSTESSEHPDPEFRTDRVLPTESFDETVPWANSCACRVHSNTKDIIIDIDNNSIARKDDKLEGYDYECDSFSDLVLPPIVTKPAKFNDLLSDAKKKETKTRSKMAAHEEEPNLNKGPLRVKIVKEDTASMKGQKNNYGRRFSVSSPGVRLRMNSPRIASRRVQANGRRSVSSAAAAAAAAARRSLSDSFAVVKSSLNPQRDFRESMVEMIVQNNIRTSKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTDNN* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2282 388 MobiDBLite consensus disorder prediction 25 59 - -
Gso9g2282 388 Pfam Transcriptional repressor, ovate 328 384 IPR006458 -
Gso9g2282 388 Pfam DNA-binding domain 1 43 IPR025830 GO:0003677
Gso9g2282 388 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 322 385 IPR006458 -
Gso9g2282 388 MobiDBLite consensus disorder prediction 73 94 - -
Gso9g2282 388 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 388 IPR038933 GO:0045892
Gso9g2282 388 MobiDBLite consensus disorder prediction 27 59 - -
Gso9g2282 388 ProSiteProfiles OVATE domain profile. 324 383 IPR006458 -
Gso9g2282 388 Coils Coil 223 243 - -
Gso9g2282 388 MobiDBLite consensus disorder prediction 112 135 - -
Gso9g2282 388 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 388 - -
Gso9g2282 388 MobiDBLite consensus disorder prediction 73 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2282 Gso-Chr9 47059745 47061625 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso9g2282 Ovate 2.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2282 - - gmx:100817790 713.375