Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2281 ATGGAATTGCCTGATACAATCAGTACAGCCATGTATAAGGGGAGATTCTGCACGAGTAGTGGAGTTAAGTCTCAGCTTGGTTATGTTGAAACCGATCCATCTGGTCGATATGGCCGCTTCAGGGATGTTCTCGGCAAAGGAGCAATGAAGACTGTGTATAGGGCATTTGATGAGTTACTAGGGATTGAAGTGGCTTGGAACCAAGTCAAGCTTGGTGATGCCTTTCACTCACCAGAGCAACTCCAGCGCCTTTATTCAGAGGTTCATCTCCTTAAGCACCTCAACCATGACTCTATGATGATCTTCTATGGTTCTTGGATCGATGTCAGCAACAGAACCTTCAACTTCGTCACTGAATTGTTCACCTCCGGCACCCTTAGAGAGTATAGGCAGAAGTATAAGAGAGTTGATATCCGAGCAGTTAAGAATTGGGCTCGCCAGATTCTAAGTGGTTTGGAGTATTTACACAGCCATAATCCTCCTGTGATACATAGAGATCTCAAGTGTGACAACATCTTTGTCAATGGCCATCAGGGGAGGGTCAAGATTGGTGACTTAGGCCTGGCAGCTATACTTAAAAGCTCCCAACATGCACACAGTGTCATCGGCACACCAGAATTCATGGCACCAGAACTGTATGAAGAGAAATACAACGAGCTGATAGATATATACTCCTTCGGTATGTGCATGATAGAGATGCTTACTTTTGAGTTCCCATATAGTGAGTGCGCCAACCCAGCTCAAATATACAAGAAAGTCACTTCGGGGAAGCTACCTGAAGCATTTTACAAAATCGAAAATTTGGAAGCCCAGGAGTTTGTGGGAAAATGTTTGACAAATGTCTCAGAGAGACCATCAGCGAAGGAGCTCTTGTTGGACCCTTTTTTAGCCATGGAACAACTTGAAATTCCATTGCCACCAAGCATACCAGCATTATTTACAAATAAGTCTTTCAAGCTTAATTGCCCTGCACCAATTCCCAGTGACCATCGTGATCAAACAAAGAACGCGGATATGACAATCAGCGGGTCAATAAACGAAGAGAACAACACTGTTTTCCTTAAAGTCCGGATATCTGACATAACGGGGCATACAAGACATGTGTTCTTCCCATTTGACACATTAAAGGACACGGCTATTCAGGTGGCAATGGAGATGGTGCAAGAACTTGAGATTAGCCACTTGGAGCCATTGGAGATTGCTGTAAGGATAGATCATGAGGTATCAGCTCTAGTTCCAACTTGGAGGGACAGGGTTAAGTGTCACCACCAACGACAGTACAGCTTTAACTACGAAGAAGATGAAGATGTCAATAACCATCACCCTTTCTTCTTATCATCTTCTCCATCATCCCCTCGCGGTTCTGGCCACATGTCTGCTTCCAACTCCTTCAAGACTCGTGTTCGTGGAAACCATTACCCTTTTACTCAAGAATGGCCTCAAGATGATCCGTTCATGGTCAACGACGACGCAAGCCCACAAGCCTCACTGAACTCCTTCAAGTGTTCGAGTTTCCAGTTCTTGGACCCGGGCCAGGAAGACGAGCACGCCCCAACAGATGCAACCGAACGCACCAAGAAGTGCACACCATTATCGTACCGTACCGAAGAACCAGAACCCAATTACACGAAACCGTTTAATTACTGCCCTCCTCGTATGGACTCTTGTTCGTGTGGTTGCAGCAGGTTCGGGTCGAGCCACGCGTACCCGAGGCTCACAAGGATCCGGTCCTGCCCGCACGAGCGGAGGAGCCAGCAGCAGCTGCTGCAACGGTCGATGATGTTGGAGGAGATGTACAAGTACAAGAGACGCTTCTTCAACAACGTTGGCGCCGTTGAGAACCTCGTGTCTAGATGA 1857 0.4674 MELPDTISTAMYKGRFCTSSGVKSQLGYVETDPSGRYGRFRDVLGKGAMKTVYRAFDELLGIEVAWNQVKLGDAFHSPEQLQRLYSEVHLLKHLNHDSMMIFYGSWIDVSNRTFNFVTELFTSGTLREYRQKYKRVDIRAVKNWARQILSGLEYLHSHNPPVIHRDLKCDNIFVNGHQGRVKIGDLGLAAILKSSQHAHSVIGTPEFMAPELYEEKYNELIDIYSFGMCMIEMLTFEFPYSECANPAQIYKKVTSGKLPEAFYKIENLEAQEFVGKCLTNVSERPSAKELLLDPFLAMEQLEIPLPPSIPALFTNKSFKLNCPAPIPSDHRDQTKNADMTISGSINEENNTVFLKVRISDITGHTRHVFFPFDTLKDTAIQVAMEMVQELEISHLEPLEIAVRIDHEVSALVPTWRDRVKCHHQRQYSFNYEEDEDVNNHHPFFLSSSPSSPRGSGHMSASNSFKTRVRGNHYPFTQEWPQDDPFMVNDDASPQASLNSFKCSSFQFLDPGQEDEHAPTDATERTKKCTPLSYRTEEPEPNYTKPFNYCPPRMDSCSCGCSRFGSSHAYPRLTRIRSCPHERRSQQQLLQRSMMLEEMYKYKRRFFNNVGAVENLVSR* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2281 618 Gene3D Transferase(Phosphotransferase) domain 1 121 301 - -
Gso9g2281 618 Gene3D Phosphorylase Kinase; domain 1 22 119 - -
Gso9g2281 618 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 3 618 - -
Gso9g2281 618 PANTHER WNK KINASE 3 618 - -
Gso9g2281 618 SUPERFAMILY Protein kinase-like (PK-like) 40 297 IPR011009 -
Gso9g2281 618 SMART serkin_6 38 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2281 618 Pfam Protein kinase domain 42 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2281 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Gso9g2281 618 CDD STKc_WNK 36 296 - -
Gso9g2281 618 ProSiteProfiles Protein kinase domain profile. 38 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2281 Gso-Chr9 47039878 47044808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2281 19 436 MAP Kinase Kinase Kinase AT3G51630 64.235 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gso9g2281 Pkinase 3.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2281 K08867 - gmx:100272201 1257.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g2281 9 47039878 47044808 Gso1g1120 1 45403606 45410734 PCT
Gso9g2281 9 47039878 47044808 Gso3g0312 3 4664590 4670893 PCT
Gso1g1120 1 45403606 45410734 Gso9g2281 9 47039878 47044808 PCT
Gso3g0312 3 4664590 4670893 Gso9g2281 9 47039878 47044808 PCT