Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2278 ATGAGCTTCAGAGAGGGGAAGATAGAAGGAGAAGATAGGGAATGTGAAGAATCGGTGTTGGGGAGCACTGAATCCAAATCAGTGAGGGAAAATGGGTCTTTAGCAAGCACTCAGCTGACAGTTGATGAGAATCTATTGGTTGACCCTAAACTACTCTTTATTGGGTCCAAGATTGGAGAAGGAGCTCATGGGAAAGTTTATGAAGGAAGGTATGGAAATAAAATTGTTGCAATCAAAGTTCTGCATCGTGGGAGCACTTCCGAAGAAAGGGCTTCCCTTGAAAATCGTTTTGCTCGAGAAGTTAATATGATGTCTCGCGTCCACCATGACAATCTTGTTAAGTTTATTGGAGCATGTAAGGATCCTCTTATGGTAATAGTTACAGAGCTATTACCAGGGATGTCACTGCGTAAATATTTAACGAGTATCCGTCCTAAACTATTAGACCTTGATGTGGCTATAAACTTTGCCCTTGATATTGCTCGAGCCATGGATTGGCTACATGCCAATGGGATCATACACAGAGATCTGAAACCTGACAATCTATTGCTTACGGCGGACCAGAAGTCTGTTAAACTTGCAGATTTTGGTCTTGCAAGAGAAGAAACTGTGACTGAAATGATGACTGCAGAAACAGGAACTTACCGTTGGATGGCACCAGAGTTGTACAGTACTGTGACATTGCGTCAGGGAGAGAAAAAGCACTACAACAACAAGGTTGATGTATATAGCTTTGGAATTGTTTTATGGGAGCTACTAACAAACCGCATGCCCTTTGAAGGGATGTCCAATTTACAGGCTGCTTATGCTGCTGCATTTAAGCAAGAGAGGCCCGGCATTCCAGATGATATATCCCCTGAACTTGCTTTTGTCATACAATCTTGCTGGGTTGAAGATCCTAACTTGAGACCAAGCTTTAGTCAGATCATCCGCATGCTCAACGCGTTTCTCTTCACACTCTCACCACCGTCTCCTCCTTTGCCAGTACCACCTGACAATGAACCTGAGGTGGCTACAACAAGTAATGGCACCATTACTGAGTTTTCTGCCCGAAACAGAGGAAAGTTTGGCTTTCTTCGCCAATTGTTTTCTTCGAAGAGGACCAAAAACTAA 1113 0.4331 MSFREGKIEGEDRECEESVLGSTESKSVRENGSLASTQLTVDENLLVDPKLLFIGSKIGEGAHGKVYEGRYGNKIVAIKVLHRGSTSEERASLENRFAREVNMMSRVHHDNLVKFIGACKDPLMVIVTELLPGMSLRKYLTSIRPKLLDLDVAINFALDIARAMDWLHANGIIHRDLKPDNLLLTADQKSVKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPGIPDDISPELAFVIQSCWVEDPNLRPSFSQIIRMLNAFLFTLSPPSPPLPVPPDNEPEVATTSNGTITEFSARNRGKFGFLRQLFSSKRTKN* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2278 370 PANTHER SERINE-THREONINE PROTEIN KINASE 19 341 - -
Gso9g2278 370 ProSiteProfiles Protein kinase domain profile. 52 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2278 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Gso9g2278 370 PRINTS Tyrosine kinase catalytic domain signature 128 141 IPR001245 GO:0004672|GO:0006468
Gso9g2278 370 PRINTS Tyrosine kinase catalytic domain signature 166 184 IPR001245 GO:0004672|GO:0006468
Gso9g2278 370 PRINTS Tyrosine kinase catalytic domain signature 240 262 IPR001245 GO:0004672|GO:0006468
Gso9g2278 370 PRINTS Tyrosine kinase catalytic domain signature 284 306 IPR001245 GO:0004672|GO:0006468
Gso9g2278 370 MobiDBLite consensus disorder prediction 1 20 - -
Gso9g2278 370 Gene3D Phosphorylase Kinase; domain 1 40 131 - -
Gso9g2278 370 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 19 341 - -
Gso9g2278 370 SMART serkin_6 52 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2278 370 MobiDBLite consensus disorder prediction 1 31 - -
Gso9g2278 370 SUPERFAMILY Protein kinase-like (PK-like) 50 339 IPR011009 -
Gso9g2278 370 CDD STKc_MAP3K-like 58 313 - -
Gso9g2278 370 Pfam Protein tyrosine and serine/threonine kinase 54 313 IPR001245 GO:0004672|GO:0006468
Gso9g2278 370 ProSitePatterns Protein kinases ATP-binding region signature. 58 79 IPR017441 GO:0005524
Gso9g2278 370 Gene3D Transferase(Phosphotransferase) domain 1 134 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2278 Gso-Chr9 47007557 47012046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2278 36 370 MAP Kinase Kinase Kinase AT5G01850 72.981 0.0 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gso9g2278 PK_Tyr_Ser-Thr 3.7e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2278 - - gmx:100816708 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g2278 9 47007557 47012046 Gso1g1122 1 45576420 45581844 PCT
Gso9g2278 9 47007557 47012046 Gso3g0309 3 4600291 4605545 PCT
Gso1g1122 1 45576420 45581844 Gso9g2278 9 47007557 47012046 PCT
Gso3g0309 3 4600291 4605545 Gso9g2278 9 47007557 47012046 PCT