Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2272 ATGGGGTGCTTCACTGTATTGAAGAGCAAAAAGAAAAGGTCTGATCCAATTACATATGTAAAACGTGTAAGCCATAATGAGAACGTACCTACAGTACTGCCTGAACCTCAAACTCATACTCGCTCACTCCAGTCTGCTCCTCCTAGTTTTAGGACCAGAGTGAAACCCATTCAACCCATTAATAAAGTCAGTAACAATAGAGCGCGAACATTATCTGCTCCATCAACTCTTGATGCAGCAGAACAAGATGCTTTGGCTTCAATTGAGTATGAGGAACAAGAAGAGTCAAGACACCGAGCTGGATCAATGAAGGAGCATCGTTCATCTAGTCCACAACCTTTACCACTTCCATCCCCTCAGGGAGGTTGTGCATTGAAGGCTATTGGCAGCTTTAAGTCTGTGACATCAGGTGGCTCCTCTTACTATGCTTCTGGACCTTTGCCACTCCCACCTACTGGGTCACTTCGGAATTTTCTGTACGAGGAAATTGCTGCTGCTTGCCACCATTTCTCTTCTGATAGATGCATGTCAGAATGTCTTTCATCCACCATATATAAGGCTTCCTTCGGTGACGATGTTTCAAGTTCGAAGAAGTTTGAAGCTACTGTCACACGGCTTCACCCATCTTCTCAGGGCTTGAAGGAATTCATAAATGAAGTTAATACTCTTGCATCTTTGCAACATCCAAACCTCTGTAAATTGCTAGGATTTCATGCCCGAGAGGGTTCAGAACATAGAATGCTGGTTTATGAGAGGCTATACCATGGAAGCTTGGATCGCTTATTGTATGGAAGATCTGATGGGCCATCAATTGATTGGAATACAAGAATGAAAATTGCTATATGTGCTGCACAAGGTCTAACTTTCTTGCATGAAGAAGGGCCTTTTCAGGCAATGTATAATGAGTTCTCAACAGCCAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTTGGACATATTCCCGAGGAAGAGATTTCAAGCAGTTCATCTGCTGTTGGAAACCTATCAATGGAAACCCTGGAGAAAGGAATGCTCACACCAAAGAGCAACGTATGGAGTTTTGGAATTTTTCTTCTGGAGCTACTCACAGGAAGAAAGAATCTCGATAGCCGTCACCCCAAGGAAGAGAGGAATTTAGTCAAGTGGAGCCGGCCTTTCCTAGCTGACAACTACCGTCTGTCATTGATCATGGATCCTCAACTCAAAGGTCGCTTTCCTTCTAAAGCCGCAAGAACAATAGCTGACATTGCACAAAGATGTCTCCAAAAGGAGCCATCAGACAGACCTACCATGAGAACTGTTGTTGAGCATCTCAAGATGATACAGGATTTGAAATACTCGTGTCGATTCCCACTGCAAGAGCCAGCATCAAACTCTGGGAAACATATGTCAAGATCACCAAGTCTCAATGGCATCATCTGCCCTGCACCGCGGTTGAGTTTCTCACCATCACCGCCATCAGGAATTCCAGTATCTGTTTCGCCTCCAAGATGGTCAGGTGGAGGGCCCATTCTCCTCCTGCCACCGCGTGCTTGTGCTTCAAGTCTCTCTTTGGAGGAGCTTGATAGGCAGGAAAGCCGCAAGTCATCATCCTCAGCCTCTAGAAGGGCTAGTGTTGAAGGATTTTGA 1650 0.4485 MGCFTVLKSKKKRSDPITYVKRVSHNENVPTVLPEPQTHTRSLQSAPPSFRTRVKPIQPINKVSNNRARTLSAPSTLDAAEQDALASIEYEEQEESRHRAGSMKEHRSSSPQPLPLPSPQGGCALKAIGSFKSVTSGGSSYYASGPLPLPPTGSLRNFLYEEIAAACHHFSSDRCMSECLSSTIYKASFGDDVSSSKKFEATVTRLHPSSQGLKEFINEVNTLASLQHPNLCKLLGFHAREGSEHRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAICAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADNYRLSLIMDPQLKGRFPSKAARTIADIAQRCLQKEPSDRPTMRTVVEHLKMIQDLKYSCRFPLQEPASNSGKHMSRSPSLNGIICPAPRLSFSPSPPSGIPVSVSPPRWSGGGPILLLPPRACASSLSLEELDRQESRKSSSSASRRASVEGF* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2272 549 Gene3D Phosphorylase Kinase; domain 1 151 251 - -
Gso9g2272 549 Gene3D Transferase(Phosphotransferase) domain 1 253 457 - -
Gso9g2272 549 MobiDBLite consensus disorder prediction 90 105 - -
Gso9g2272 549 PANTHER OS01G0822200 PROTEIN 44 548 - -
Gso9g2272 549 ProSiteProfiles Protein kinase domain profile. 170 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2272 549 MobiDBLite consensus disorder prediction 30 48 - -
Gso9g2272 549 MobiDBLite consensus disorder prediction 524 549 - -
Gso9g2272 549 SUPERFAMILY Protein kinase-like (PK-like) 149 455 IPR011009 -
Gso9g2272 549 PANTHER OS01G0588500 PROTEIN-RELATED 44 548 - -
Gso9g2272 549 Pfam Protein tyrosine and serine/threonine kinase 184 445 IPR001245 GO:0004672|GO:0006468
Gso9g2272 549 MobiDBLite consensus disorder prediction 90 119 - -
Gso9g2272 549 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2272 Gso-Chr9 46958834 46963936 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2272 149 449 Receptor kinase-like Gene Family AT4G02010 37.255 1.01e-55 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Gso9g2272 PK_Tyr_Ser-Thr 4.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2272 - - gmx:100808712 1056.97