Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso9g2272 | ATGGGGTGCTTCACTGTATTGAAGAGCAAAAAGAAAAGGTCTGATCCAATTACATATGTAAAACGTGTAAGCCATAATGAGAACGTACCTACAGTACTGCCTGAACCTCAAACTCATACTCGCTCACTCCAGTCTGCTCCTCCTAGTTTTAGGACCAGAGTGAAACCCATTCAACCCATTAATAAAGTCAGTAACAATAGAGCGCGAACATTATCTGCTCCATCAACTCTTGATGCAGCAGAACAAGATGCTTTGGCTTCAATTGAGTATGAGGAACAAGAAGAGTCAAGACACCGAGCTGGATCAATGAAGGAGCATCGTTCATCTAGTCCACAACCTTTACCACTTCCATCCCCTCAGGGAGGTTGTGCATTGAAGGCTATTGGCAGCTTTAAGTCTGTGACATCAGGTGGCTCCTCTTACTATGCTTCTGGACCTTTGCCACTCCCACCTACTGGGTCACTTCGGAATTTTCTGTACGAGGAAATTGCTGCTGCTTGCCACCATTTCTCTTCTGATAGATGCATGTCAGAATGTCTTTCATCCACCATATATAAGGCTTCCTTCGGTGACGATGTTTCAAGTTCGAAGAAGTTTGAAGCTACTGTCACACGGCTTCACCCATCTTCTCAGGGCTTGAAGGAATTCATAAATGAAGTTAATACTCTTGCATCTTTGCAACATCCAAACCTCTGTAAATTGCTAGGATTTCATGCCCGAGAGGGTTCAGAACATAGAATGCTGGTTTATGAGAGGCTATACCATGGAAGCTTGGATCGCTTATTGTATGGAAGATCTGATGGGCCATCAATTGATTGGAATACAAGAATGAAAATTGCTATATGTGCTGCACAAGGTCTAACTTTCTTGCATGAAGAAGGGCCTTTTCAGGCAATGTATAATGAGTTCTCAACAGCCAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTTGGACATATTCCCGAGGAAGAGATTTCAAGCAGTTCATCTGCTGTTGGAAACCTATCAATGGAAACCCTGGAGAAAGGAATGCTCACACCAAAGAGCAACGTATGGAGTTTTGGAATTTTTCTTCTGGAGCTACTCACAGGAAGAAAGAATCTCGATAGCCGTCACCCCAAGGAAGAGAGGAATTTAGTCAAGTGGAGCCGGCCTTTCCTAGCTGACAACTACCGTCTGTCATTGATCATGGATCCTCAACTCAAAGGTCGCTTTCCTTCTAAAGCCGCAAGAACAATAGCTGACATTGCACAAAGATGTCTCCAAAAGGAGCCATCAGACAGACCTACCATGAGAACTGTTGTTGAGCATCTCAAGATGATACAGGATTTGAAATACTCGTGTCGATTCCCACTGCAAGAGCCAGCATCAAACTCTGGGAAACATATGTCAAGATCACCAAGTCTCAATGGCATCATCTGCCCTGCACCGCGGTTGAGTTTCTCACCATCACCGCCATCAGGAATTCCAGTATCTGTTTCGCCTCCAAGATGGTCAGGTGGAGGGCCCATTCTCCTCCTGCCACCGCGTGCTTGTGCTTCAAGTCTCTCTTTGGAGGAGCTTGATAGGCAGGAAAGCCGCAAGTCATCATCCTCAGCCTCTAGAAGGGCTAGTGTTGAAGGATTTTGA | 1650 | 0.4485 | MGCFTVLKSKKKRSDPITYVKRVSHNENVPTVLPEPQTHTRSLQSAPPSFRTRVKPIQPINKVSNNRARTLSAPSTLDAAEQDALASIEYEEQEESRHRAGSMKEHRSSSPQPLPLPSPQGGCALKAIGSFKSVTSGGSSYYASGPLPLPPTGSLRNFLYEEIAAACHHFSSDRCMSECLSSTIYKASFGDDVSSSKKFEATVTRLHPSSQGLKEFINEVNTLASLQHPNLCKLLGFHAREGSEHRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAICAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADNYRLSLIMDPQLKGRFPSKAARTIADIAQRCLQKEPSDRPTMRTVVEHLKMIQDLKYSCRFPLQEPASNSGKHMSRSPSLNGIICPAPRLSFSPSPPSGIPVSVSPPRWSGGGPILLLPPRACASSLSLEELDRQESRKSSSSASRRASVEGF* | 550 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso9g2272 | 549 | Gene3D | Phosphorylase Kinase; domain 1 | 151 | 251 | - | - | |
Gso9g2272 | 549 | Gene3D | Transferase(Phosphotransferase) domain 1 | 253 | 457 | - | - | |
Gso9g2272 | 549 | MobiDBLite | consensus disorder prediction | 90 | 105 | - | - | |
Gso9g2272 | 549 | PANTHER | OS01G0822200 PROTEIN | 44 | 548 | - | - | |
Gso9g2272 | 549 | ProSiteProfiles | Protein kinase domain profile. | 170 | 447 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso9g2272 | 549 | MobiDBLite | consensus disorder prediction | 30 | 48 | - | - | |
Gso9g2272 | 549 | MobiDBLite | consensus disorder prediction | 524 | 549 | - | - | |
Gso9g2272 | 549 | SUPERFAMILY | Protein kinase-like (PK-like) | 149 | 455 | IPR011009 | - | |
Gso9g2272 | 549 | PANTHER | OS01G0588500 PROTEIN-RELATED | 44 | 548 | - | - | |
Gso9g2272 | 549 | Pfam | Protein tyrosine and serine/threonine kinase | 184 | 445 | IPR001245 | GO:0004672|GO:0006468 | |
Gso9g2272 | 549 | MobiDBLite | consensus disorder prediction | 90 | 119 | - | - | |
Gso9g2272 | 549 | MobiDBLite | consensus disorder prediction | 28 | 48 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso9g2272 | Gso-Chr9 | 46958834 | 46963936 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso9g2272 | 149 | 449 | Receptor kinase-like Gene Family | AT4G02010 | 37.255 | 1.01e-55 | 197 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-II | Gso9g2272 | PK_Tyr_Ser-Thr | 4.1e-26 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso9g2272 | - | - | gmx:100808712 | 1056.97 |