Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2267 ATGATGCAATTCAGCATGTGTGTGTTGTTTCTGATCCTCCTTGCACCGGTTATGTTGGTGTTTTCTGTGGACACTGGTTTCAATGATGATGTGTTGGGGTTGATTGTGTTCAAGGCTGGCTTGGATGACCCCAAAAGGAAACTCTCTTCTTGGAATGAGGATGATAACAGCCCTTGCAACTGGGAAGGTGTGAAGTGTGATCCTTCATCAAATAGGGTCACAGCTCTTGTCCTTGATGGTTTCTCTCTTTCTGGGCATGTTGATAGGGGCTTGTTGAGGTTGCAATCCCTTCAAATTCTCTCACTTTCAAGGAACAACTTCACTGGGTCAATAAACCCTGATCTTCCTCTCCTTGGGAGTTTGCAAGTTGTGGACTTGAGTGACAACAACCTCTCTGGGGAGATCCCAGAAGGGTTTTTCCAACAATGTGGCTCTCTAAGAACAGTTTCATTTGCCAAGAACAACCTCACAGGAAAGATTCCTGAGTCCTTGAGCTCATGCTCCAATTTGGCAAGTGTTAACTTCTCCTCTAATCAGCTCCATGGGGAATTGCCTAATGGAGTGTGGTTCTTGAGGGGGCTGCAGTCGCTTGATCTGTCAGATAACTTTCTTGAGGGAGAGATTCCTGAAGGGATTCAGAATCTGTATGATATGAGGGAGTTGAGTCTTCAGAGGAACAGGTTCAGTGGAAGGCTTCCTGGGGACATTGGAGGCTGCATACTTCTGAAATCACTTGACTTGAGTGGTAACTTTCTCTCAGAACTCCCTCAGTCAATGCAAAGACTCACTTCATGCACATCAATTAGTCTGCAGGGAAATTCATTCACAGGAGGCATTCCCGAATGGATTGGAGAATTGAAGAATCTAGAGGTGTTGGATCTTTCTGCCAATGGATTCTCTGGTTGGATTCCAAAGTCATTAGGGAATCTTGACTCTTTGCATAGATTGAATTTGTCTAGGAATCGGTTGACAGGAAACATGCCTGATTCTATGATGAACTGCACCAAGCTTTTGGCTCTTGACATAAGCCACAATCACTTGGCAGGCCATGTTCCTTCATGGATTTTTAAGATGGGTGTGCAAAGTATCTCTCTTTCTGGGGATGGCTTCAGCAAGGGCAATTATCCTTCACTGAAGCCCACACCTGCATCTTATCATGGTCTTGAGGTTTTGGATTTGTCATCCAATGCATTTTCTGGTGTGCTTCCATCTGGCATTGGGGGACTTGGTAGCCTCCAAGTCTTGAATTTTTCCACCAACAATATCTCTGGTTCTATTCCTGTGGGTATAGGAGACCTCAAGTCTTTGTACATTGTTGACCTGAGTGACAACAAGCTTAATGGAAGCATTCCTTCTGAAATAGAAGGGGCAACTTCACTCAGTGAGCTAAGACTGCAAAAGAACTTCCTTGGTGGGAGAATTCCAGCCCAAATTGACAAGTGTTCATCTCTAACATTTTTGATTCTTTCTCACAACAAGCTTACTGGTTCAATCCCTGCAGCCATTGCAAACCTCACCAATCTTCAGTATGTAGATTTGTCATGGAATGAACTCTCTGGAAGTTTACCCAAGGAGTTAACAAATCTTTCCCATCTTTTCTCATTTAATGTATCCTACAACCACCTTGAAGGTGAACTACCTGTGGGAGGCTTCTTCAACACCATCTCCTTCTCATCCGTCTCCGGTAACCCATTGTTGTGTGGTTCCGTTGTCAACCACTCCTGTCCTTCTGTTCATCCCAAACCTATTGTTCTAAACCCCAACTCTTCTGGTTCCAACTCCAGCATTTCCTTGCAGAACCATCGGCATAAGATCATACTAAGTATCTCTGCTCTTATTGCTATTGGAGCAGCTGCTTTTATTGCCGTTGGTGTTGTGGCTGTTACTGTCCTAAATATCCATGTGCGTTCCTCAATGGAACATACAGCTGCTCCATTTTCATTTTCTGGTGGTGAGGACTACAGTGGTTCGCCGGCAAATGATCCAAACTATGGCAAGCTTGTCATGTTTTCTGGTGATGCAGACTTTGCTGATGGAGCACATAATATTCTCAATAAAGAAAGTGAAATAGGCCGTGGGGGATTTGGAGTTGTGTATCGCACTTTCCTTCGTGACGGGCGTGCTGTTGCAATCAAGAAGCTCACAGTCTCCAGTTTGATCAAGTCCCAAGAAGAGTTTGAGAGAGAAATTAAAAAGCTTGGGAAAGTGAGGCACCCGAATCTCGTGGCACTTGAAGGTTATTATTGGACTTCATCCTTGCAGCTCCTTATCTATGATTACCTTTCCAGTGGGAGTTTGCATAAACTTCTACATGATGATAACAGCAAAAATGTATTCTCATGGCCACAAAGGTTCAAGGTTATTCTTGGTATGGCAAAAGGGTTGGCTCATTTGCACCAAATGAACATAATCCACTACAATCTCAAATCAACCAATGTGCTGATTGATTGTTCTGGCGAGCCGAAGGTCGGAGACTTTGGCTTGGTGAAACTCTTGCCGATGCTAGACCATTGTGTTTTGAGCAGCAAAATCCAAAGTGCGCTCGGATACATGGCACCCGAGTTTGCTTGCCGCACAGTCAAGATAACCAAGAAATGCGACGTGTATGGTTTTGGGATCCTGGTGCTGGAGATCGTGACAGGAAAAAGACCTGTGGAGTACATGGAGGATGATGTGGTGGTTCTTTGTGACATGGTGAGGGGTGCATTGGAAGAAGGCAAGGTGGAGCAATGTGTTGATGGGAGGCTCCTTGGTAACTTTGCTGCAGAGGAAGCAATTCCTGTGATAAAATTGGGGTTGATTTGTGCATCGCAAGTGCCATCAAATCGTCCAGACATGGCTGAGGTAGTCAACATATTAGAGTTAATCCAATGCCCTTCAGAAGGACAAGAGGAATTAGAATGA 2904 0.4452 MMQFSMCVLFLILLAPVMLVFSVDTGFNDDVLGLIVFKAGLDDPKRKLSSWNEDDNSPCNWEGVKCDPSSNRVTALVLDGFSLSGHVDRGLLRLQSLQILSLSRNNFTGSINPDLPLLGSLQVVDLSDNNLSGEIPEGFFQQCGSLRTVSFAKNNLTGKIPESLSSCSNLASVNFSSNQLHGELPNGVWFLRGLQSLDLSDNFLEGEIPEGIQNLYDMRELSLQRNRFSGRLPGDIGGCILLKSLDLSGNFLSELPQSMQRLTSCTSISLQGNSFTGGIPEWIGELKNLEVLDLSANGFSGWIPKSLGNLDSLHRLNLSRNRLTGNMPDSMMNCTKLLALDISHNHLAGHVPSWIFKMGVQSISLSGDGFSKGNYPSLKPTPASYHGLEVLDLSSNAFSGVLPSGIGGLGSLQVLNFSTNNISGSIPVGIGDLKSLYIVDLSDNKLNGSIPSEIEGATSLSELRLQKNFLGGRIPAQIDKCSSLTFLILSHNKLTGSIPAAIANLTNLQYVDLSWNELSGSLPKELTNLSHLFSFNVSYNHLEGELPVGGFFNTISFSSVSGNPLLCGSVVNHSCPSVHPKPIVLNPNSSGSNSSISLQNHRHKIILSISALIAIGAAAFIAVGVVAVTVLNIHVRSSMEHTAAPFSFSGGEDYSGSPANDPNYGKLVMFSGDADFADGAHNILNKESEIGRGGFGVVYRTFLRDGRAVAIKKLTVSSLIKSQEEFEREIKKLGKVRHPNLVALEGYYWTSSLQLLIYDYLSSGSLHKLLHDDNSKNVFSWPQRFKVILGMAKGLAHLHQMNIIHYNLKSTNVLIDCSGEPKVGDFGLVKLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITKKCDVYGFGILVLEIVTGKRPVEYMEDDVVVLCDMVRGALEEGKVEQCVDGRLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEVVNILELIQCPSEGQEELE* 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2267 967 Gene3D Ribonuclease Inhibitor 187 281 IPR032675 -
Gso9g2267 967 Gene3D Ribonuclease Inhibitor 28 186 IPR032675 -
Gso9g2267 967 ProSiteProfiles Protein kinase domain profile. 684 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2267 967 SUPERFAMILY Protein kinase-like (PK-like) 685 957 IPR011009 -
Gso9g2267 967 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 958 - -
Gso9g2267 967 SMART LRR_sd22_2 433 456 - -
Gso9g2267 967 SMART LRR_sd22_2 505 531 - -
Gso9g2267 967 SMART LRR_sd22_2 286 312 - -
Gso9g2267 967 SMART LRR_sd22_2 191 214 - -
Gso9g2267 967 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 6 958 - -
Gso9g2267 967 Pfam Protein kinase domain 685 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2267 967 Gene3D Transferase(Phosphotransferase) domain 1 761 965 - -
Gso9g2267 967 Gene3D Ribonuclease Inhibitor 361 581 IPR032675 -
Gso9g2267 967 CDD STKc_IRAK 690 956 - -
Gso9g2267 967 Pfam Leucine Rich Repeat 194 215 IPR001611 GO:0005515
Gso9g2267 967 Pfam Leucine Rich Repeat 242 260 IPR001611 GO:0005515
Gso9g2267 967 ProSitePatterns Protein kinases ATP-binding region signature. 690 713 IPR017441 GO:0005524
Gso9g2267 967 SUPERFAMILY RNI-like 268 555 - -
Gso9g2267 967 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Gso9g2267 967 Pfam Leucine rich repeat 288 347 IPR001611 GO:0005515
Gso9g2267 967 Pfam Leucine rich repeat 483 542 IPR001611 GO:0005515
Gso9g2267 967 Pfam Leucine rich repeat 120 180 IPR001611 GO:0005515
Gso9g2267 967 Pfam Leucine rich repeat 387 446 IPR001611 GO:0005515
Gso9g2267 967 SMART LRR_typ_2 529 553 IPR003591 -
Gso9g2267 967 SMART LRR_typ_2 310 334 IPR003591 -
Gso9g2267 967 SMART LRR_typ_2 505 528 IPR003591 -
Gso9g2267 967 SMART LRR_typ_2 409 433 IPR003591 -
Gso9g2267 967 SMART LRR_typ_2 385 408 IPR003591 -
Gso9g2267 967 SMART LRR_typ_2 215 239 IPR003591 -
Gso9g2267 967 SMART LRR_typ_2 191 214 IPR003591 -
Gso9g2267 967 SMART LRR_typ_2 242 262 IPR003591 -
Gso9g2267 967 SMART LRR_typ_2 286 309 IPR003591 -
Gso9g2267 967 SMART LRR_typ_2 118 142 IPR003591 -
Gso9g2267 967 Gene3D Phosphorylase Kinase; domain 1 673 760 - -
Gso9g2267 967 SUPERFAMILY L domain-like 46 366 - -
Gso9g2267 967 Gene3D Ribonuclease Inhibitor 287 359 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2267 Gso-Chr9 46928447 46932760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2267 1 964 Receptor kinase-like Gene Family AT5G01890 62.243 0.0 1139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Gso9g2267 Pkinase 6.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2267 - - gmx:100813535 1858.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g2267 9 46928447 46932760 Gso1g1134 1 45863573 45868117 PCT
Gso9g2267 9 46928447 46932760 Gso3g0280 3 3963861 3968483 PCT
Gso1g1134 1 45863573 45868117 Gso9g2267 9 46928447 46932760 PCT
Gso3g0280 3 3963861 3968483 Gso9g2267 9 46928447 46932760 PCT