Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2262 ATGAGTTCTAATGAGTCCTTGCTTTTGGAATCATCGGATTCTCGTCCAGTGATTCATCACCGCCGCGGGAAATCGGGTTCCCGGAGCTACCTCTCCCTCCATGGTTCCTTCTCTTCTTCCGCCTTTGATGATGCTTTCGCTGAGAGCATCGTTTTGGATGTGAAGGAACGAGACGGTGGGGACGTTGTGTTGTCTAGAGATTGTAGTCTCTACACTGCAGCGTTTGGGAATAATATTAGCGGTTCTGAGGCTCAGTCCCCGTGGCAGTTTCCCTTGGAATGCCCCCAGCCCGAGACGAAGAGCCCGGTATCTTGGGGTGCAATGGAACTGCCTGATGCCGCCAATAGCCGTAGCGTGCCATTCGAGATATCCGGAGCTTCATCTCAGGTGCAGGACAGCAGGTTGAATGGTAAATCACAGAGAATTCGGCACAAAAGTTTGCAATTTGATGATGCTGCCTTACATGAGGACAGTGCCAGGCTGATTTATATCAATGATCCGAGGAGGACGAATGATAAGTATGAGTTCACCGGGAATGAGATCCGGACTAGCAGATACACCTTTGTTACCTTTTTGCCCAAGAATCTCTTCATTCAGTTTCATCGGGTGGCTTATCTGTATTTCCTTGCTATTGCTGCTCTCAATCAGCTTCCGCCACTGGCTGTGTTTGGGAGGACTGTGTCACTTTTCCCGCTTTTGTTTGTTCTTTGTGTCACGGCTATTAAGGATGGCTATGAGGATTGGCGGAGGCACAGGTCAGATCGCAATGAGAACAACCGGGAGTCTCTGGTGCTTCAGTCCGGTGATTTCCGATCAAAGAAATGGAAGAAAATACAAGCTGGTGAGGTTGTTAAGATCTTTGCCGATGAGACAATTCCAGCTGACATGGTCTTGTTGGGGACGAGTGATCAAAGTGGGCTTGCCTATATTCAGACAATGAATTTGGATGGAGAATCAAATTTGAAGACAAGGTATGCTAGGCAGGAAACAGCTTCAGCGGTTGCATCAGAAGCTTGTGATGTTTTTGGTGTAATTAGATGTGAGCAACCGAACCGGAATATTTATGAGTTCACGGCCAACATGGAGTTCAATGGGCTAAAGTTTTCCCTTAGCCAGTCAAACATTGTTCTGCGTGGTTGCCAATTGAAGAACACAGATTGGATAATTGGTGTTGTAGTCTATGCAGGACAGGAAACAAAAGCAATGTTGAACAGTGCAGCTTCTCCTTCCAAGAGAAGCAGACTGGAAACTTACATGAACAGAGAAACCCTTTGGTTGTCAATTTTTCTTTTTATCATGTGTTTGGTTGTGGCCATTGGGATGTGTCTTTGGTTGGTACGCCACAAGAACCAGCTTGATACCTTGCCTTACTACAGAAAAAGATACTTCACCAATGGACCGGATAATGGAAAGAAATATAAGTATTATGGGATACCAATGGAAGCATTTTTTTCCTTTTTGAGTTCTGTTATAGTGTTTCAGATAATGATACCAATATCTCTTTACATCACAATGGAGTTAGTTCGATTGGGTCAGTCATACTTCATGATTGAAGACAGGGATATGTATGATGCCTGCTCTGGGTCAAGGTTTCAGTGTAGATCATTAAATATAAATGAAGATTTGGGTCAAATACGCTATGTATTTTCAGACAAGACAGGAACACTAACAGAAAACAAAATGGAATTCCAGAGGGCTAGTGTACATGGGAAGAATTACGGGAGCTCCTTGCCTATGGTTGATAATACAGCAGCAGCAGCAGATGTTATTCCTAAACGGAGTTGGAAGCTCAAATCTGCAATTGCAGTTGATTCTGAACTGATGACAATGTTGCAGAAAGACTCAAATAGAGAAGAAAAAATTGCTGCTCATGAGTTTTTTCTTACATTGGCTGCTTGTAACACTGTAATCCCTATACTTGGTGATGATGAATTTTCTAGTATTGGAACTAATGAAGTAAATGAAGATATTAGACGCATTGATTACCAGGGAGAATCTCCTGATGAACAAGCTCTAGTTTCTGCGGCCTCTGCATATGGATATACTCTTTTTGAACGCACATCTGGACATATTGTTATTGATGTCAACGGTGAGAAACTCAGATTGGATGTATTGGGTCTGCATGAGTTTGATAGTGTGCGAAAAAGAATGTCTGTTGTTATTCGGTTTCCTGACAACGCGGTAAAGGTGTTAGTCAAAGGTGCTGATACTTCAATGTTTAGCATTTTGGAAAATGGCAGTGAGAGTAACAATAACATATGGCATGCAACTCAGAGCCATTTGAATGAATATTCTTCACAAGGTTTGCGCACTCTTGTAGTAGCCTCCAGGGATCTTTCTGGTGCTGAACATGAGGAGTGGCAAAGCAGGTATGAAGAGGCAAGCACTTCGTTGACTGACAGAGCTACTAAACTACGGCAAACAGCAGCTCTTATAGAAAGCAATTTAAAGTTACTTGGAGCAACTGGAATTGAGGACAAGCTACAAGAGGGTGTACCAGAAGCAATTGAGGCTCTACGGCAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACGGCAATTTCAATTGGTCTTTCCTGCAAACTTCTTAGTGGAGACATGCAGCAGATTATTATAAATGGCACTTCAGAGGTTGAATGTAGAAATCTTTTGGCTGATGCTAAAGCCAAATATGGTGTGAAATCATCAAGTGGAGGGTGTCGGAATCAAAAGCACAAAACCAATGCTGGACATGGTGATCTTGATATTCCCAATGGTTCAAAGTCTTTGAGCTTTCCCAAATGTAATCCTGGAAACGAAGAAGGAACTGATGCTCCATTGGCACTCATAATTGATGGAAACAGTTTGGTTTATATTTTGGAGAAGGAACTGGAGTCAGAGCTTTTCGACCTTGCAACTTCCTGTAGGGTTGTGCTGTGTTGTCGAGTTGCACCCTTGCAAAAGGCAGGAATTGTTGATTTGATAAAGAGCCGCACAGATGATATGACACTGGCCATAGGTGATGGGGCCAATGATGTGTCAATGATCCAAATGGCAGATGTTGGTGTAGGAATATGTGGGCAGGAAGGGCGCCAAGCAGTGATGGCATCAGATTTTGCTATGGGACAGTTTCAGTTCTTGAAAAAATTACTTCTGGTTCATGGGCACTGGAATTATCAGCGTGTTGGTTATTTAGTTCTGTACAACTTCTACCGCAATGCTGTCTTTGTAATGATGTTATTTTGGTATATATTATGCACGGCTTTTTCTACAACTTCTGCGCTGACGGATTGGAGTAGTGTTTTCTATTCTGTGATATACACATCTATACCTACCATTATTGTTGGTATTCAGGACAAGGACTTGAGCCATAGGACACTCTTGCAGTATCCGAAACTGTATGGTGCAGGTCACAGGCAAGAAGCTTACAATATGCAATTATTTTGGATCACAATGATGGACACAGTATGGCAGAGCCTTGTTCTTTTCTACATCCCATTGTTCACCTATAAGGACAGTTCAATTGACATATGGAGCATGGGCAGTTTGTGGACGATTGCAGTTGTTATCCTTGTAAATGTACACCTTGCTATGGACATCAACCGTTGGGTATTAATTACTCATGTTGCTATCTGGGGATCAATAATCATTACATATGGTTGCATGGTGGTACTGGATTCTATACCTGTGTTTCCCAATTACTGGACTATTTATCATCTGGCAAGGTCCCCTACATATTGGATAACAATTTTGCTTATAATTATTGTGGCATTGCTCCCTCGCTTTACTTGCAAAGTTGTTTATCAAATCTTTTGGCCTTCGGATATCCAGATAGCTAGAGAAGCTGAGTTAATGAGAAAACGACATGATAATTTGCAGCCGAGGCAACAAGTTTCCAGTTAA 3894 0.4255 MSSNESLLLESSDSRPVIHHRRGKSGSRSYLSLHGSFSSSAFDDAFAESIVLDVKERDGGDVVLSRDCSLYTAAFGNNISGSEAQSPWQFPLECPQPETKSPVSWGAMELPDAANSRSVPFEISGASSQVQDSRLNGKSQRIRHKSLQFDDAALHEDSARLIYINDPRRTNDKYEFTGNEIRTSRYTFVTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQSGDFRSKKWKKIQAGEVVKIFADETIPADMVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQETASAVASEACDVFGVIRCEQPNRNIYEFTANMEFNGLKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSRLETYMNRETLWLSIFLFIMCLVVAIGMCLWLVRHKNQLDTLPYYRKRYFTNGPDNGKKYKYYGIPMEAFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDRDMYDACSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFQRASVHGKNYGSSLPMVDNTAAAADVIPKRSWKLKSAIAVDSELMTMLQKDSNREEKIAAHEFFLTLAACNTVIPILGDDEFSSIGTNEVNEDIRRIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNAVKVLVKGADTSMFSILENGSESNNNIWHATQSHLNEYSSQGLRTLVVASRDLSGAEHEEWQSRYEEASTSLTDRATKLRQTAALIESNLKLLGATGIEDKLQEGVPEAIEALRQAGIKVWVLTGDKQETAISIGLSCKLLSGDMQQIIINGTSEVECRNLLADAKAKYGVKSSSGGCRNQKHKTNAGHGDLDIPNGSKSLSFPKCNPGNEEGTDAPLALIIDGNSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVMMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIIVGIQDKDLSHRTLLQYPKLYGAGHRQEAYNMQLFWITMMDTVWQSLVLFYIPLFTYKDSSIDIWSMGSLWTIAVVILVNVHLAMDINRWVLITHVAIWGSIIITYGCMVVLDSIPVFPNYWTIYHLARSPTYWITILLIIIVALLPRFTCKVVYQIFWPSDIQIAREAELMRKRHDNLQPRQQVSS* 1298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2262 1297 PRINTS P-type cation-transporting ATPase superfamily signature 549 563 - -
Gso9g2262 1297 PRINTS P-type cation-transporting ATPase superfamily signature 1003 1022 - -
Gso9g2262 1297 SFLD Haloacid Dehalogenase 533 1054 - -
Gso9g2262 1297 Gene3D - 815 1043 IPR023214 -
Gso9g2262 1297 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 153 1295 - -
Gso9g2262 1297 MobiDBLite consensus disorder prediction 1 28 - -
Gso9g2262 1297 SUPERFAMILY HAD-like 536 1047 IPR036412 -
Gso9g2262 1297 Gene3D - 235 405 - -
Gso9g2262 1297 CDD P-type_ATPase_APLT_Dnf-like 178 1163 - -
Gso9g2262 1297 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 555 832 IPR023299 GO:0000166
Gso9g2262 1297 Gene3D - 661 796 IPR023299 GO:0000166
Gso9g2262 1297 Pfam Phospholipid-translocating ATPase N-terminal 162 227 IPR032631 -
Gso9g2262 1297 SFLD p-type atpase 533 1054 IPR044492 -
Gso9g2262 1297 Pfam E1-E2 ATPase 260 507 - -
Gso9g2262 1297 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 153 1295 - -
Gso9g2262 1297 SUPERFAMILY Calcium ATPase, transmembrane domain M 176 1270 IPR023298 -
Gso9g2262 1297 SUPERFAMILY Calcium ATPase, transduction domain A 259 401 IPR008250 -
Gso9g2262 1297 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 176 1278 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Gso9g2262 1297 Pfam Phospholipid-translocating P-type ATPase C-terminal 1031 1271 IPR032630 -
Gso9g2262 1297 Pfam Cation transport ATPase (P-type) 654 740 - -
Gso9g2262 1297 ProSitePatterns E1-E2 ATPases phosphorylation site. 551 557 IPR018303 -
Gso9g2262 1297 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 973 1089 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gso9g2262 1297 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 809 867 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gso9g2262 1297 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 482 572 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2262 Gso-Chr9 46877341 46885005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2262 139 1280 Primary Pumps ATPases AT5G04930 57.006 0.0 1339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2262 K14802 - gmx:100812459 2550.78