Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2259 ATGGTGTCCTCTCAGTTTTCTGGTTTGACTATGGCTGGCTACAAACCTTCACAGACTCAGTTACTCTTTCCTGCAAACCTTCCTGATACTGTGAACACGGAGCATATTGAGCTGGATTTCTCTGATGTCTTTGGTCCTGTTACGGTAGATTTGAATAACATTGATTCCACTACTGGTGAGCCCCTAGAAGAAGTGAACGAGCTTGTTTATGATGACCCGCCAGTGATTTACACCCGCTCACATTCTTTGGTTGGCCCTTCTACTTGTGTTAGTCAATCACTTAAGCTTGGCAAGCTCACTATTCATGAGACCGAGGATTCATTGGAACTAGTGGATCATGTCAATGGAGAGACCATTAAAGACATCAAAGATTCTTCATTTGTCGACAAATCATTGAAAGATGAAGATGGGAATCTCAAGAAGATCCAGAGAGTTAGCATTGAAGATTTTGAGATTTTGAAGGTTGTGGGGCAGGGTGCATTTGCAAAAGTGTATCAGGTGAGGAAAAAGGGTACTTCAGAAATATATGCTATGAAGGTTATGCGGAAGGACAAGATTATGGAGAAGAACCATGCTGAGTACATGAAAGCTGAGAGGGATATTTGGACAAAGATAGAACACCCATTTGTTGTACAACTTAGATACTCTTTTCAGACAAAATACAGACTGTATCTTGTGCTGGATTTTGTAAATGGGGGCCATCTGTTCTTCCAGCTGTATCACCAAGGCCTTTTCAGAGAGGATCTAGCACGCATATACACTGCTGAGATTGTTTGTGCAGTTTCCCATCTCCATTCAAATGGAATAATGCACAGGGATCTAAAACCTGAAAATATCCTACTAGACGCTGATGGCCATGTTATGTTGACTGATTTTGGCTTAGCTAAACAATTTGAAGAGAGTACTAGATCAAATTCGATGTGTGGTACATTAGAGTACATGGCACCTGAAATTATTCTTGGCAAAGGCCATGATAAGGCTGCTGATTGGTGGAGCGTAGGTATTCTACTGTTTGAGATGCTTACTGGAAAGCCGCCTTTCTGTGGCGGAAACCGTGACAAAATTCAGCAGAAGATAGTTAAAGACAAGATTAAGCTGCCAGCATTTTTGTCAAGTGAAGCACATTCACTGTTGAAAGGGCTGCTACAGAAGGAACCAGGTAGGCGCTTAGGTTGTGGACCCCGGGGTGTTGAGGAAATTAAAAGCCACAAGTGGTTTAAACCAATCAATTGGAGAAAGTTGGAAGCACGAGAAATCCAACCAAGCTTTAGGCCAGAAGTAGCTGGTGTGCAGTGTGTTGCCAACTTTGAGAAGCGCTGGACTGATATGCCTGTTGTTGACTCACCTGCTGCCAGCCCAAATGGCGGAAACCCCTTTAAGGATTTCTCTTATGTGAGGCCTGCAGCCTCTTTTCTTCAAAGGAATAGCCCTGCTTACTAA 1440 0.4299 MVSSQFSGLTMAGYKPSQTQLLFPANLPDTVNTEHIELDFSDVFGPVTVDLNNIDSTTGEPLEEVNELVYDDPPVIYTRSHSLVGPSTCVSQSLKLGKLTIHETEDSLELVDHVNGETIKDIKDSSFVDKSLKDEDGNLKKIQRVSIEDFEILKVVGQGAFAKVYQVRKKGTSEIYAMKVMRKDKIMEKNHAEYMKAERDIWTKIEHPFVVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREDLARIYTAEIVCAVSHLHSNGIMHRDLKPENILLDADGHVMLTDFGLAKQFEESTRSNSMCGTLEYMAPEIILGKGHDKAADWWSVGILLFEMLTGKPPFCGGNRDKIQQKIVKDKIKLPAFLSSEAHSLLKGLLQKEPGRRLGCGPRGVEEIKSHKWFKPINWRKLEAREIQPSFRPEVAGVQCVANFEKRWTDMPVVDSPAASPNGGNPFKDFSYVRPAASFLQRNSPAY* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2259 479 ProSiteProfiles Protein kinase domain profile. 150 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2259 479 Gene3D Phosphorylase Kinase; domain 1 147 447 - -
Gso9g2259 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Gso9g2259 479 PANTHER SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 1 477 - -
Gso9g2259 479 ProSiteProfiles AGC-kinase C-terminal domain profile. 407 474 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gso9g2259 479 ProSitePatterns Protein kinases ATP-binding region signature. 156 179 IPR017441 GO:0005524
Gso9g2259 479 CDD STKc_AGC 156 406 IPR045270 GO:0004674|GO:0005524
Gso9g2259 479 SUPERFAMILY Protein kinase-like (PK-like) 147 466 IPR011009 -
Gso9g2259 479 Pfam Protein kinase domain 150 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2259 479 SMART pkinase_C_6 407 466 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gso9g2259 479 PANTHER RIBOSOMAL PROTEIN S6 KINASE 1 477 - -
Gso9g2259 479 Pfam Protein kinase C terminal domain 429 464 IPR017892 GO:0004674|GO:0005524|GO:0006468
Gso9g2259 479 SMART serkin_6 150 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2259 479 Gene3D Transferase(Phosphotransferase) domain 1 230 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2259 Gso-Chr9 46855189 46858950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2259 1 476 AGC Kinase Gene Family AT3G08720 69.710 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Gso9g2259 Pkinase 2.1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2259 K04688 - gmx:100804819 963.755