Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2256 ATGATGACGAGCATGAATCGGTACTATGTTTGTGTTCCATTGTTTGTGTGCTTGGTATTGGCTATTGAACTTGTTGTAGCAGAGGATTTCCAGCCTACAGATAAGATCTTGCTGAATTGTGGTGGCCCTCCTAGTAGTACTGATACTGATGGCCGTGAATGGACCACGGATAATGGTTCCAAGTTTGGTTCCTCCACCGCAAAATCCGCCACCTCACCGGCGGCGACACAGGACCCTGCCGTCCCTCAGGTGCCCTACATGACGGCGCGTGTTTTCCACGCACCGTATACCTATACTTTTCCTGTGGCTTCTGGCTGGAAGTTCCTCCGACTGCACTTTTACTCCGCTTCTTATTCCAGCCTCAATGCATCGGATGCGCTGTTTGCTGTGGCAGCGAATTCCTACACAGTTCTTAGGAACTTCAGTGTTGCTCAGACCACCTTGGCTTTGAATTATGCCTACATTATGAGGGAATTTGCCATCCATGTGGAAGGGGAGAGCTTGAATGTGACTTTCACTCCATCTACCAATGCCTCGAACGCTTACGCTTTTGTTAATGGGATTGAGATTGTGTCCATGCCTGAGATTTATACTTCCACTGATGGAACTTTAATGATGGTGGGTTCAAATTCTCCTTTCCCTATTGATAACAGCACTGCACTTGAGTGTGTTTATAGGTTGAATGTGGGTGGGAATGATATCTCTCCCTCCCATGATACTGGTATGTTTAGGTCATGGTCTGATGACATGCCCTTCCTCTATGGGGCTGCATTTGGAGTTACCGAGCCTGCTGATCCAGATGTGAAGTTTGAGTATCCTCCGGGCACGCCAAGTTATATTGCTCCACTTGATGTCTACAGTACGGCCAGAACAATGGGCCCAAATCCCGAGATCAACACGAATTACAACTTGAGTTGGATCTTCAACATTGATAGTGGGTTTTCCTATCTTGTGAGACTCCACTTTGCTGAGGTATCGTCAAATATAACCAAAATTAATCAAAGAGTATTTGATATATTCCTCAATAATCAAACTGCTATGCCTCAAGCTGATGTTATTGCCTGGGCAAAGGAATTTGACCTTTCACATTCAAATGGGGTTCCAGTGCATAAAGATTATGTTGTATTTGTTCCTAATGGAGAACCACGGCAGGACCTGTGGCTTGCATTGCATCCGGATAAAACTGAGAAGCCCATGTATTATGATGCAATCTTGAATGGAGTGGAGATATTCAAAATTAATGACTCTACAGGTAATCTGGCAGGGGCAAATCCTATTCCTCCTCCTGTGCAAGACATAATTGACCCATCAACGGCTAGAGCATCTCATCATGGTAAATCAAAGAATCATACGGGCATAATTGCAGGAGGTGTTGCTGGAGGAGTTGTTTTACTACTTGTGGTTGGGCTATTTGCTTTTGCTGCATCCCATCGTCGTAGGCAAGGAAAGGATTCTGGTACAAGTGAAGGGCCATCTGGCTGGCTTCCACTTTCTCTTTATGGTAATTCACACTCTGCAGCTTCTGCCAAGACCAACACAACAGGAAGCTATGCATCCTCTCTTCCATCAAACCTTTGTCGTCATTTCTCATTTGCTGAAATCAAGGCTGCCACGAACAACTTTGACGAGGCTTTGCTTCTTGGTGTGGGAGGATTTGGTAAGGTTTACAAAGGGGAAATTGATGGTGGAACAACCAAGGTAGCAATTAAACGTGGGAATCCACTATCTGAGCAGGGGGTGCATGAGTTCCAAACTGAGATTGAAATGCTCTCAAAACTTCGTCACCGCCACCTTGTTTCACTGATTGGCTACTGTGAAGAAAACACTGAAATGATCCTTGTGTATGACTATATGGCCTATGGAACACTCAGGGAGCATCTGTACAAGACTCAGAAACCTCCACGCCCATGGAAGCAAAGGCTTGAGATATGCATTGGAGCTGCTCGGGGTTTACACTATCTACACACTGGTGCTAAACACACTATCATCCACCGTGATGTGAAGACAACAAACATTTTACTAGATGAGAAGTGGGTGGCTAAGGTTTCTGATTTTGGACTGTCGAAAACTGGTCCAACATTGGATAATACCCATGTAAGTACTGTGGTAAAGGGTAGTTTTGGGTACTTGGATCCAGAATACTTCAGGAGGCAGCAACTGACTGACAAATCTGATGTTTACTCGTTTGGTGTGGTTCTCTTTGAGGTATTGTGCGCTCGACCAGCATTGAACCCCACCCTTGCTAAGGAGCAAGTGAGTCTGGCTGAGTGGGCAGCTCATTGCTACCAGAAAGGCATTCTTGACTCAATTATTGATCCTTATCTAAAGGGAAAAATAGCTCCAGAATGCTTCAAGAAGTTCGCCGAGACTGCGATGAAGTGCGTGGCTGACCAGGGCATTGATAGGCCATCCATGGGTGATGTCTTGTGGAACCTTGAATTTGCTTTGCAGCTGCAAGAAAGTGCAGAGGAAAGTGGCAACGGTTTTGGTGACATTCACTGTGAAGAGCCACTGTACACAGATTCTAAAGGAAAGAAGGACTCTGATCCGGGTTATGATGGCAACGTGACCGACTCCAGAAGCAGTGGCATTTCAATGAGCATTGGAGGTAGAAGCTTGGCTAGTGAAGACTCTGATGGGCTAACCCCTAGTGCTGTGTTCTCCCAGATCATGAATCCAAAAGGTCGTTAA 2691 0.4563 MMTSMNRYYVCVPLFVCLVLAIELVVAEDFQPTDKILLNCGGPPSSTDTDGREWTTDNGSKFGSSTAKSATSPAATQDPAVPQVPYMTARVFHAPYTYTFPVASGWKFLRLHFYSASYSSLNASDALFAVAANSYTVLRNFSVAQTTLALNYAYIMREFAIHVEGESLNVTFTPSTNASNAYAFVNGIEIVSMPEIYTSTDGTLMMVGSNSPFPIDNSTALECVYRLNVGGNDISPSHDTGMFRSWSDDMPFLYGAAFGVTEPADPDVKFEYPPGTPSYIAPLDVYSTARTMGPNPEINTNYNLSWIFNIDSGFSYLVRLHFAEVSSNITKINQRVFDIFLNNQTAMPQADVIAWAKEFDLSHSNGVPVHKDYVVFVPNGEPRQDLWLALHPDKTEKPMYYDAILNGVEIFKINDSTGNLAGANPIPPPVQDIIDPSTARASHHGKSKNHTGIIAGGVAGGVVLLLVVGLFAFAASHRRRQGKDSGTSEGPSGWLPLSLYGNSHSAASAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYKGEIDGGTTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENTEMILVYDYMAYGTLREHLYKTQKPPRPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPALNPTLAKEQVSLAEWAAHCYQKGILDSIIDPYLKGKIAPECFKKFAETAMKCVADQGIDRPSMGDVLWNLEFALQLQESAEESGNGFGDIHCEEPLYTDSKGKKDSDPGYDGNVTDSRSSGISMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR* 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2256 896 MobiDBLite consensus disorder prediction 854 889 - -
Gso9g2256 896 Gene3D - 36 194 - -
Gso9g2256 896 Gene3D - 220 414 - -
Gso9g2256 896 MobiDBLite consensus disorder prediction 41 78 - -
Gso9g2256 896 MobiDBLite consensus disorder prediction 840 896 - -
Gso9g2256 896 Pfam Protein tyrosine and serine/threonine kinase 547 809 IPR001245 GO:0004672|GO:0006468
Gso9g2256 896 CDD STKc_IRAK 547 813 - -
Gso9g2256 896 SMART serkin_6 541 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2256 896 MobiDBLite consensus disorder prediction 41 79 - -
Gso9g2256 896 Pfam Malectin-like domain 38 413 IPR024788 -
Gso9g2256 896 Gene3D Transferase(Phosphotransferase) domain 1 618 830 - -
Gso9g2256 896 PANTHER OS07G0166700 PROTEIN 21 859 IPR045272 GO:0004714|GO:0006468
Gso9g2256 896 Gene3D Phosphorylase Kinase; domain 1 502 617 - -
Gso9g2256 896 ProSitePatterns Serine/Threonine protein kinases active-site signature. 662 674 IPR008271 GO:0004672|GO:0006468
Gso9g2256 896 ProSitePatterns Protein kinases ATP-binding region signature. 547 570 IPR017441 GO:0005524
Gso9g2256 896 ProSiteProfiles Protein kinase domain profile. 541 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2256 896 SUPERFAMILY Protein kinase-like (PK-like) 515 814 IPR011009 -
Gso9g2256 896 PANTHER - 21 859 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2256 Gso-Chr9 46834105 46837648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2256 19 896 Receptor kinase-like Gene Family AT3G51550 74.548 0.0 1325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso9g2256 Malectin_like 5e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2256 - - gmx:100499644 1770.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1751 18 49892920 49896446 Gso9g2256 9 46834105 46837648 GST