Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2252 ATGCTACTACAGTCCTACTTTACCACAATACCAATTTTCCTACTCCTGCTTGTGTTTCCTCACACTAAAGCTAATCTACATTCAGAAAAGCAAGCCCTCCTTGATTTTGCTGCTGCACTTCATCATGGTCCAAAAGTCAATTGGAACTCTAGTACCTCAATCTGCACTTCATGGGTGGGAGTTACATGCAGTCATGATGGTTCCCATGTTCTTTCTGTGAGGCTTCCAGGTGTCGGATTGCGCGGTTCTCTCCCACCAAACACACTTGGTAAGCTTAATGGCCTCATTAGTCTCAGTCTTAGGTCCAACAGCTTGAGGGGGAACCTTCCAACTGACCTACTTTCCCTTCCTTCTCTGCGCTTTGTATATCTCCAACACAACAACTTCTCAGGTGAAATTCCTGATTCTCTGCCACCGCGGCTTATCTTTCTTGATTTGTCCCATAACTCTTTCACAGGACAAATTCCAGCCTCAATCCAAAACTTGACACATTTGATAGGACTTAACCTCCGAAAAAACTCTCTCACAGGACCTATTCCTGATGTTAACCTTCCTAGCCTTAAGGATTTGGATTTGAGCTTCAACTACTTGAATGGCTCTATTCCTTCAGGTCTCCATAAGTTCCATGCCTCCTCATTTAGAGGTAATTTGATGTTATGTGGAGCACCTTTGAAACAATGTTCTTCAGTTTCCCCTAATACCACATTGTCTCCACTAACAGTCTCAGAGAGACCAAGTGATCTATCAAACAGGAAAATGAGCGAGGGAGCAAAAATAGCAATTGTTTTGGGGGGTGTCACATTGCTGTTTCTTCCAGGTCTTTTGGTAGTGTTCTTCTGTTTCAAGAAAAAAGTTGGTGAACAAAATGTAGCACCTGCAGAGAAAGGTCAGAAGCTTAAGCAGGACTTTGGGAGTGGTGTGCAAGAATCTGAGCAAAACAAGCTTGTATTCTTTGAGGGTTGTTCTTATAATTTTGATCTGGAGGACATGTTAAGAGCTTCAGCTGAAGTTCTTGGGAAGGGAAGTTGTGGAACAACATACAAAGCCATCTTGGAGGATGGAACAACAGTGGTTGTGAAGAGGTTAAGAGAAGTGGCAATGGGGAAAAAAGAGTTTGAACAGCAAATGGAGATTGTCCAGAGACTTGATCATCATCAAAATGTGATTCCCCTTCGTGCTTACTACTATTCCAAAGATGAAAAACTAATGGTTTATGACTACTCAACAGCCGGCAGTTTTTCCAAGCTATTGCATGGAACAACGGAAACTGGACGAGCTCCACTAGATTGGGATACAAGGTTGAAGATCATGGTCGGAGCTGCTAGGGGCATTGCTCATATCCACTCAGCCAATGGAAGGAAACTTGTCCATGGCAATATAAAATCATCTAATGTGATTCTCTCAATAGATCTCCAAGGCTGCATATCAGATTTTGGCCTAACTCCCCTAACAAATTTCTGTGCCTCCTCCAGAAGTCCAGGCTATGGAGCACCTGAAGTTATCGAATCACGAAAGTCCACTAAAAAATCTGATGTGTACAGCTTTGGTGTTCTCCTCCTTGAGATGCTGACTGGCAAAACACCAGTTCAGTATTCAGGGCATGATGAAGTGGTTGATCTTCCAAAGTGGGTCCAATCTGTTGTTAGAGAGGAATGGACTGCTGAAGTGTTTGATCTTGAGCTAATGAGGTATCCAAACATTGAAGATGAACTTGTGCAGATGCTGCAACTGGCAATGGCATGCGTGGCAGCGATGCCGGACACGAGGCCTTCCATGGAGGAAGTTGTCAAGACAATTGAAGAAATTAGAGCATCCATTTATTAA 1824 0.4326 MLLQSYFTTIPIFLLLLVFPHTKANLHSEKQALLDFAAALHHGPKVNWNSSTSICTSWVGVTCSHDGSHVLSVRLPGVGLRGSLPPNTLGKLNGLISLSLRSNSLRGNLPTDLLSLPSLRFVYLQHNNFSGEIPDSLPPRLIFLDLSHNSFTGQIPASIQNLTHLIGLNLRKNSLTGPIPDVNLPSLKDLDLSFNYLNGSIPSGLHKFHASSFRGNLMLCGAPLKQCSSVSPNTTLSPLTVSERPSDLSNRKMSEGAKIAIVLGGVTLLFLPGLLVVFFCFKKKVGEQNVAPAEKGQKLKQDFGSGVQESEQNKLVFFEGCSYNFDLEDMLRASAEVLGKGSCGTTYKAILEDGTTVVVKRLREVAMGKKEFEQQMEIVQRLDHHQNVIPLRAYYYSKDEKLMVYDYSTAGSFSKLLHGTTETGRAPLDWDTRLKIMVGAARGIAHIHSANGRKLVHGNIKSSNVILSIDLQGCISDFGLTPLTNFCASSRSPGYGAPEVIESRKSTKKSDVYSFGVLLLEMLTGKTPVQYSGHDEVVDLPKWVQSVVREEWTAEVFDLELMRYPNIEDELVQMLQLAMACVAAMPDTRPSMEEVVKTIEEIRASIY* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2252 607 SUPERFAMILY Protein kinase-like (PK-like) 336 599 IPR011009 -
Gso9g2252 607 Gene3D Phosphorylase Kinase; domain 1 298 407 - -
Gso9g2252 607 Pfam Protein kinase domain 335 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2252 607 PANTHER OS05G0588300 PROTEIN 9 605 - -
Gso9g2252 607 CDD STKc_IRAK 338 602 - -
Gso9g2252 607 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Gso9g2252 607 Gene3D Ribonuclease Inhibitor 140 229 IPR032675 -
Gso9g2252 607 SUPERFAMILY L domain-like 44 224 - -
Gso9g2252 607 Gene3D Transferase(Phosphotransferase) domain 1 409 606 - -
Gso9g2252 607 ProSiteProfiles Protein kinase domain profile. 332 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2252 607 Gene3D Ribonuclease Inhibitor 27 139 IPR032675 -
Gso9g2252 607 PANTHER OS05G0480400 PROTEIN 9 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2252 Gso-Chr9 46802998 46806454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2252 12 605 Receptor kinase-like Gene Family AT5G58300 59.536 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso9g2252 Pkinase 1.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2252 - - gmx:100810832 1184.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1755 18 49924740 49928255 Gso9g2252 9 46802998 46806454 GST