Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2227 ATGGCTGCCTGTGCTTTGTTCAGTGGTGGCGGTAACATTACCGAAGATGGCAATGTTAATGGAAGTGGAAGTGCTAATAGCACTCCTTTGACAAGTGCCTCTAACTCTAGCAACATGAGCAACGAAGAACAACAACAACTACATGCTGGTGGCATCATGCCACAGCCTTATTGTGAGAGAAAAATGATGAGGAAAAGAATGGCTTCTGAGATGGAAGTTAACGTTCACGCCACTCCACCACACAACTCTTCCTCCACAACAAGTGATTATCCTAGGTTTCCTCGTCGAAGCAACACCAACACGAACATGTTAGAAAAAGGGTCCCCCACAACAACATCATCAACAACAACGTTAGCCGCAGGTACATGTAATAATAATAATAATAATAATAATAATAATAATAATAATAGCCATCATTATAATAATAGTAACAATAGTAATAGTGGTAATATTTCATCAAGAGATAACGTTGCTATTCCAAATTACCCCACTGTGACGGTCACAACCAACTACTCCACTATGTTGCTACCTTCTTCCCTCAATTCCTCTGGTGTTGCTCCAAACTACAACAGCACTCATCAACACCATCACTTCCAAGGACTCGTTGAAAGCCAGGACCAGCAAAACTCCGTGCCTGCAGTTTGTGGATTCTCAGGTTTACCACTTTTTCCATCTCAAAGCCAAAGAAACCGAGACAACATAAGAAACAGTGGTGGAAACATTGTTGACGTGGTTGCTTCCTCTTCTCCTTCTCCTTCCATGGACGACACTTCAGGAGCAGCAACGACAAGTGGTTGGATCGATGGTATATTGAAGGATCTCATTCACAGTTCCAACAGTGTTTCGATTCCTCAACTAATCAGCAACGTGAGGGAGATCATATACCCTTGCAACCCAAACCTCGCAATGGTTCTTGAATACAGGCTTCGCCTTCTTCTCACCGAGTCTACCACCCCGCAACACAAAAGAGGCACAGAAGGGGTGCCTCTTCTTCCTTCTGTTTCCTCAGTGAAGCTCATGAATAACCGTGTTGTGGATGGCATTGCTCCTAATTTGCACTTCACAGATGCTTCAGGTGGTGCTGTGGTTGTGAATCAGCACATGTCCAATTGGGGTGTGCCTCAAATCACTCCTCACCATGATAACACCAACACCAACACCAACACCAACAATAACAACAACCCTTCAGTTTCTTTGGTTACTTTGCCTTCACCAGCACCTCCACCTCATTACTCACCACCAGAAGAGAAGAACCCTCAAGAAGAAGATCTAGCAGCAGCAACCACCACTGCTCATGAGGTGGCACTTTCAAGAAAGAAGAAAGAGGAGCTGCGTGAACAGAAGAAGAAAGACGAAGAGGGTCTGCATCTCCTCACTCTTCTGCTTCAGTGTGCAGAAGCGGTTTCAGCTGAGAATCTAGAAGATGCCAACAAGATGCTTCTGGAGATTTCTCAGTTATCAACACCGTTCGGCACTTCAGCACAGCGTGTGGCAGCATATTTCTCAGAAGCCATATCAGCAAGGTTGGTGAGTTCATGTCTAGGGATATACGCCACTTTGCCACACACACACCAAAGCCACAAGGTAGCTTCAGCTTTTCAAGTGTTCAATGGTATTAGTCCTTTCGTGAAGTTCTCACACTTCACAGCAAACCAAGCAATTCAAGAAGCCTTCGAAAGAGAAGAGAGGGTGCACATCATAGATCTTGATATAATGCAAGGGTTGCAGTGGCCTGGTTTGTTTCACATTCTAGCTTCAAGACCTGGTGGAGCACCTTATGTGAGGCTCACGGGGCTTGGTACCTCTATGGAAGCACTTGAAGCCACGGGAAAACGTTTGTCTGATTTTGCAAACAAACTTTGCCTTCCCTTTGAGTTCTTCCCTGTTGCTGAGAAAGTTGGGAACCTTGACCCTGAGAGGCTCAATGTTAGCAAAACAGAAGCTGTTGCTGTTCACTGGTTGCAACATTCCCTCTATGATGTCACTGGCTCAGACACCAACACCTTGTGGCTCTTGCAAAGACTGGCACCTAAAGTGGTGACTGTGGTAGAGCAGGACCTAAGCAATACTGGTTCATTCTTGGGGAGGTTTGTGGAAGCCATACACTACTACTCAGCATTATTTGACTCTCTTGGGTCAAGCTATGGGGAGGAGAGTGAGGAGAGGCATGTGGTGGAACAGCAACTATTGTCTAGGGAGATTCGAAATGTGCTAGCTGTTGGGGGGCCATCAAGGACTGGAGAACCAAAGTTTCACAATTGGAGGGAAAAGCTTCAACAGTGTGGTTTTAGAGGCATATCTCTAGCTGGTAATGCTGCCACACAAGCTAGTCTACTCCTTGGTATGTTCCCATCTGAGGGTTATACCTTGGTGGAGGACAATGGCATTCTTAAACTTGGTTGGAAGGACCTTTGCTTGCTCACTGCTTCAGCTTGGAGACCACCTTTCCATGGTGCCATTACCCACCACAACTAG 2475 0.4566 MAACALFSGGGNITEDGNVNGSGSANSTPLTSASNSSNMSNEEQQQLHAGGIMPQPYCERKMMRKRMASEMEVNVHATPPHNSSSTTSDYPRFPRRSNTNTNMLEKGSPTTTSSTTTLAAGTCNNNNNNNNNNNNNSHHYNNSNNSNSGNISSRDNVAIPNYPTVTVTTNYSTMLLPSSLNSSGVAPNYNSTHQHHHFQGLVESQDQQNSVPAVCGFSGLPLFPSQSQRNRDNIRNSGGNIVDVVASSSPSPSMDDTSGAATTSGWIDGILKDLIHSSNSVSIPQLISNVREIIYPCNPNLAMVLEYRLRLLLTESTTPQHKRGTEGVPLLPSVSSVKLMNNRVVDGIAPNLHFTDASGGAVVVNQHMSNWGVPQITPHHDNTNTNTNTNNNNNPSVSLVTLPSPAPPPHYSPPEEKNPQEEDLAAATTTAHEVALSRKKKEELREQKKKDEEGLHLLTLLLQCAEAVSAENLEDANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPHTHQSHKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGAPYVRLTGLGTSMEALEATGKRLSDFANKLCLPFEFFPVAEKVGNLDPERLNVSKTEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSNTGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGEPKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPFHGAITHHN* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2227 824 MobiDBLite consensus disorder prediction 434 449 - -
Gso9g2227 824 MobiDBLite consensus disorder prediction 76 155 - -
Gso9g2227 824 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 179 815 IPR005202 -
Gso9g2227 824 PANTHER PROTEIN SCARECROW 179 815 - -
Gso9g2227 824 MobiDBLite consensus disorder prediction 13 48 - -
Gso9g2227 824 MobiDBLite consensus disorder prediction 6 55 - -
Gso9g2227 824 MobiDBLite consensus disorder prediction 372 400 - -
Gso9g2227 824 Pfam GRAS domain family 458 813 IPR005202 -
Gso9g2227 824 MobiDBLite consensus disorder prediction 75 155 - -
Gso9g2227 824 MobiDBLite consensus disorder prediction 372 449 - -
Gso9g2227 824 ProSiteProfiles GRAS family profile. 448 813 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2227 Gso-Chr9 46581237 46585224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2227 412 814 GRAS Transcription Factor Family AT3G54220 81.127 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso9g2227 GRAS 6.1e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2227 - - gmx:100803919 1509.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1786 18 50325408 50329613 Gso9g2227 9 46581237 46585224 GST