Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2224 ATGGCAGAGGGAAAAGGTAGAGTTTGTGTCACTGGAGGCACTGGGTTCCTTGGTTCATGGATCATCAAGAGACTCCTTGAAGATGGATATGCTGTTAACACCACTATTAGATCTGACCCAGGACGAAAGAGAGATGTTAGCTTCCTCACAAACCTACCAGGGGCATCCGAAAAGCTAAAAATTTTCAACGCTGATCTCAGCGACCCAGAAAGTTTTGATCCAGCAGTTGAGGGATGTGTTGGAATTTTCCACACAGCCACGCCAATTGATTTTGCAGTGAACGAGCCTGAGGAAGTGGTAACCAAAAGAGCCATCGATGGAGCACTAGGCATAATGAAAGCAGGCCTAAAAGCAAAGACAGTGAAGAGGGTTGTTTACACTTCTAGTGGCTCCACCGTTTCCTTCAGCAGCCTTGAAGAAAAAGATGTGGTGGATGAGAGTGTTTGGAGTGATGTGGATATGCTTAGGAGTGTAAAGCCTTTTGGTTGGTCCTATGCAGTTTCAAAAGTGTTGACTGAGAAGGCTGTGCTTGAATTTGGAGAACATAATGGGTTGGAAGTTGCAACTGTTATTGCTCCTTTTATTGTTGGTCCTTTTGTTTGTCCCAAGCTTCCTGACTCTATCGAAAAAGCTCTGCTTATGGTGTTGGGCAAAAAAGAAGAAATTAGTGTCATTCGTTACCATATGGTACATGTGGATGATGTGGCTAGAGCACATATCTTCCTGCTTGAGCATCCTAATCCAAAAGGGAGATATAATTGCTCACCATTCATTGTACCCATTGAAGAGATGGGTGAACTTCTTTCAGCCAAATACCCGGAATTTCAACTACCAACAGTAGACGAGCTGAAGGGAATTAAAGGTGCCAAGCAACCACATTTAACCTCCAAGAAACTTGTTGATGCTGGTTTTGAGTTCAAGTATAGCTTAGAGGACATGTTTCAGGATGCAATTGAATGCTGCAAGGAAAAGGGTTATCTTTAA 984 0.4319 MAEGKGRVCVTGGTGFLGSWIIKRLLEDGYAVNTTIRSDPGRKRDVSFLTNLPGASEKLKIFNADLSDPESFDPAVEGCVGIFHTATPIDFAVNEPEEVVTKRAIDGALGIMKAGLKAKTVKRVVYTSSGSTVSFSSLEEKDVVDESVWSDVDMLRSVKPFGWSYAVSKVLTEKAVLEFGEHNGLEVATVIAPFIVGPFVCPKLPDSIEKALLMVLGKKEEISVIRYHMVHVDDVARAHIFLLEHPNPKGRYNCSPFIVPIEEMGELLSAKYPEFQLPTVDELKGIKGAKQPHLTSKKLVDAGFEFKYSLEDMFQDAIECCKEKGYL* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2224 327 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 322 IPR036291 -
Gso9g2224 327 Pfam NAD dependent epimerase/dehydratase family 8 253 IPR001509 -
Gso9g2224 327 PANTHER DIHYDROFLAVONOL 4-REDUCTASE-LIKE PROTEIN 1 319 - -
Gso9g2224 327 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 1 319 - -
Gso9g2224 327 CDD FR_SDR_e 8 304 - -
Gso9g2224 327 Gene3D - 5 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2224 Gso-Chr9 46555147 46557828 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2224 4 327 Monolignol Biosynthesis Gene Families AT2G02400 37.048 3.03e-60 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2224 - K13265 gmx:100793687 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1789 18 50352163 50354886 Gso9g2224 9 46555147 46557828 GST