Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2222 ATGGAAGAGGAGAAAGGAAGAGTTTGTGTAACTGGAGGCACAGGGTTTATTGGTTCATGGATCATCAAGAGACTCCTTGAGGGTGGTTACACTGTTAATACCACTATTAGATCTGATCCAGGGCGCAAGAGGGATGTTAGTTTCCTCACAAATCTTCCATTTGCATCCAAAAAGCTAAGAATTTTCAATGCTGATCTCAGCAACCCAGAGAGTTTCAGTGAAGCAATTGAAGGGTGCATTGGCGTGCTCCACACAGCTACTCCAATTGATTTAGAAGTGAACGAGCCGGAGGAAATAGTGACCAAAAGAACCATTGATGGAGCATTAGGCATTCTAAAAGCATGCCTCAATTCAAAGACAGTGAAGAGGGTTGTTTACACTTCTAGTGCTTCTGCTGTTTATTGGCAGGGCAAAGAAGAGGAAGTGATGGATGAGAGTTATTGGAGTGACGAAAATCTTCTTAGAGATTTGAAACCATTTGCTTGGTCGTATTCAATTTCTAAGACATTGGCAGAGAAGGCAGTTCTTGAATTTGGAGAACAGCATGGGTTGGATGTTGTGACTCTAATTCCTACTTTTGTTCTTGGACCCTTCATTTGTCCTAAGCTTCCAGGCTCAGTTTATACTTCACTGGCTTTTTTATTTGGTGAGAAGAATCCACTTGGTGCCTCTCGTATCCACATGGTGCATGTTGATGATGTAGCACGAGCACATATATTCCTGCTTGAGCATCCTAATCCAAGAGGGAGATATAATTGCTCACCATTCATTGCAACTGTCGAAGAAATAGCAGAACTTCTTTCTGCCAAATACCCAAAATTTCAAATACCAACACCGGACGAGGTGAAGAAAATTAATGGTCCCAAGCTTCCACATTTAAACTCGAAGAAACTTATTGATGCCGGATTTGAGTTTAAGTATAGCTTGGAGGAAATGTATGAGGATGCAATTGAATGCTGCAAGGAAAAGGGTCATCTATGA 981 0.4149 MEEEKGRVCVTGGTGFIGSWIIKRLLEGGYTVNTTIRSDPGRKRDVSFLTNLPFASKKLRIFNADLSNPESFSEAIEGCIGVLHTATPIDLEVNEPEEIVTKRTIDGALGILKACLNSKTVKRVVYTSSASAVYWQGKEEEVMDESYWSDENLLRDLKPFAWSYSISKTLAEKAVLEFGEQHGLDVVTLIPTFVLGPFICPKLPGSVYTSLAFLFGEKNPLGASRIHMVHVDDVARAHIFLLEHPNPRGRYNCSPFIATVEEIAELLSAKYPKFQIPTPDEVKKINGPKLPHLNSKKLIDAGFEFKYSLEEMYEDAIECCKEKGHL* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2222 326 Gene3D - 5 326 - -
Gso9g2222 326 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 1 318 - -
Gso9g2222 326 CDD FR_SDR_e 8 303 - -
Gso9g2222 326 Pfam NAD dependent epimerase/dehydratase family 8 253 IPR001509 -
Gso9g2222 326 PANTHER DIHYDROFLAVONOL REDUCTASE 1 318 - -
Gso9g2222 326 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 321 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2222 Gso-Chr9 46545941 46548589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2222 5 326 Monolignol Biosynthesis Gene Families AT2G02400 38.182 1.93e-60 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2222 - K13265 gmx:102659875 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1790 18 50358063 50360818 Gso9g2222 9 46545941 46548589 GST