Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2186 ATGAATGTGATGCGAAGGTTGAAAAGCATTGCTTCTGGGAGGACTTCCATTTCATCAGATCCTGGAGGGGATTGTACCACAAAAAGAGCAAAGTTTGATCAAGACACCGAAGGAAAGGTCAATGAGGAAACATATCCTAATGAGAGGTGCGGAAAAGATCAGGAACACCATGTAGATTCCAATGTTCCTTCAGTGCCTAGAACTGAGAAGTCAGGTTATTATCAGCTTCCAAAAGAATTAAATGAAATGAAGATTGGAGATGACAAAGGCAAAAACAACAATGAGAAGGATATGGAAGCAACTATTGTGAGTGGTAATGGAACAGAAACCGGTGAAATTATTACAACTGCTATTGGAGGTCGAGACGGACAACCAAAGCGGACAATCTCATACATAGCAGAACGTGTGGTTGGCACTGGTTCTTTTGGTGTTGTTTATCAGGCTAAGTGCCTTGAAACTGGTGAAGCAGTTGCAATAAAAAAAGTGTTGCAAGACAAGAGATATAAGAATAGGGAACTGCAGGTTATGCGAATGCTTGACCATACTAATGTTCTCAGACTAAAACACTGTTTCTATTCAACTGCTGAGAAAGATGATTTGTACCTTAACCTAGTTTTGGAGTATGTACCTGAAACTGTCTACAGAGTTTCAAAGCACTATGTCAGAATGCACCAACATATGCCTATCATTAATGTGCAACTGTATACATACCAGATATGTCGGGGTTTAAATTATTTGCATCATGTGATTGGAGTCTGCCATCGGGACATCAAACCCCAGAATCTATTGGTTAATCCCCAGACTCATCAGTTAAAAGTATGTGATTTTGGGAGTGCAAAGATGTTGGTGCCTGGCGAACCCAACATATCGTATATATGCTCGCGGTATTATAGAGCTCCAGAACTTATATTTGGTGCAACAGAATACACAACTGCTATTGATATTTGGTCTGCTGGTTGTGTGTTGGCTGAGCTTCTTCTAGGACATCCAATGTTTCCCGGAGAGAGTGGGGTTGATCAATTGGTAGAGATCATTAAGATCTTGGGAACACCAACCAGAGAAGAAATAAAGTGCATGAATCCAAATTACACCGAATTTAAGTTTCCTCAGATAAAAGCACACCCATGGCATAAGGTTTTTCACAAGAAGATGCCTTCAGAAGCAGTGGATCTAGTGTCAAGGATGCTTCAGTATTCACCGAATCTACGATGCACTGCTTTGGAAGCATGTGCACACCCTTTCTTTGATGATCTGCGAGAACCAAATGCATGCTTGCCAAATGGGCGACCATTGCCTCCATTGTTCAACTTCACTGCTCAAGAACTGGCGGATGCACCCGATGAGTTGCGTAGGCGTCTCATTCCTGAGCATGCAAGAAGTTGA 1383 0.4179 MNVMRRLKSIASGRTSISSDPGGDCTTKRAKFDQDTEGKVNEETYPNERCGKDQEHHVDSNVPSVPRTEKSGYYQLPKELNEMKIGDDKGKNNNEKDMEATIVSGNGTETGEIITTAIGGRDGQPKRTISYIAERVVGTGSFGVVYQAKCLETGEAVAIKKVLQDKRYKNRELQVMRMLDHTNVLRLKHCFYSTAEKDDLYLNLVLEYVPETVYRVSKHYVRMHQHMPIINVQLYTYQICRGLNYLHHVIGVCHRDIKPQNLLVNPQTHQLKVCDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLAELLLGHPMFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKKMPSEAVDLVSRMLQYSPNLRCTALEACAHPFFDDLREPNACLPNGRPLPPLFNFTAQELADAPDELRRRLIPEHARS* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2186 460 ProSitePatterns Protein kinases ATP-binding region signature. 137 161 IPR017441 GO:0005524
Gso9g2186 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Gso9g2186 460 PANTHER SHAGGY-LIKE KINASE 6 460 - -
Gso9g2186 460 CDD STKc_GSK3 126 418 IPR039192 -
Gso9g2186 460 MobiDBLite consensus disorder prediction 26 63 - -
Gso9g2186 460 SMART serkin_6 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2186 460 Pfam Protein kinase domain 133 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2186 460 Gene3D Phosphorylase Kinase; domain 1 116 210 - -
Gso9g2186 460 Gene3D Transferase(Phosphotransferase) domain 1 211 459 - -
Gso9g2186 460 ProSiteProfiles Protein kinase domain profile. 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2186 460 MobiDBLite consensus disorder prediction 9 23 - -
Gso9g2186 460 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 6 460 - -
Gso9g2186 460 MobiDBLite consensus disorder prediction 1 69 - -
Gso9g2186 460 SUPERFAMILY Protein kinase-like (PK-like) 130 443 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2186 Gso-Chr9 46190438 46195113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2186 137 424 Core Cell Cycle Gene Families AT1G76540 35.548 7.59e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Gso9g2186 Pkinase 2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2186 K00924 - gmx:100784150 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2029 18 53056822 53061632 Gso9g2186 9 46190438 46195113 GST