Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso9g2178 | ATGTTGGGTTCAGGCACCAATTTGGTGACAACGGTCATTGGGTTTGGGATGAGTGCCACTTTCATTGTGTTTGTGTGCACCAGAATCATTTGTGGAAGGCTAAGAGGGGGTGTTGAATCTCGGATGATGTATGAGATTGAATCAAGAATTGATTTAGAACGGCCAGAACATCATGTTAATGACCCTGACTCCGATCCTGTTCTGCTCGATGCAATCCCTACTTTGAAGTTCAACCAAGAGGCTTTCAGTTCCCTTGAACACACACAGTGTGTAATATGTTTGGCAGATTACAAAGAAAGAGAAGTATTGCGGATCATGCCCAAATGTGGCCACACTTTTCATCTTTCTTGCATTGATATATGGCTGAGAAAGCAATCTACCTGTCCAGTATGCCGTCTGCCGTTGAAAAACTCTTCCGAAACAAAACATGTGAGACCTGTGACATTTACCATGAGCCAATCCCTTGACGAGTCTCACACATCAGAAAGAAACGATGAAATCGAGAGACATGTTGAACCTACATCTACTGCAGCCAGCAACTCTTTACAACCAACTTCAGGGGAACAAGAAGCAAGGCAATGA | 582 | 0.4364 | MLGSGTNLVTTVIGFGMSATFIVFVCTRIICGRLRGGVESRMMYEIESRIDLERPEHHVNDPDSDPVLLDAIPTLKFNQEAFSSLEHTQCVICLADYKEREVLRIMPKCGHTFHLSCIDIWLRKQSTCPVCRLPLKNSSETKHVRPVTFTMSQSLDESHTSERNDEIERHVEPTSTAASNSLQPTSGEQEARQ* | 194 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso9g2178 | 193 | MobiDBLite | consensus disorder prediction | 173 | 193 | - | - | |
Gso9g2178 | 193 | MobiDBLite | consensus disorder prediction | 150 | 193 | - | - | |
Gso9g2178 | 193 | SMART | ring_2 | 90 | 131 | IPR001841 | - | |
Gso9g2178 | 193 | ProSiteProfiles | Zinc finger RING-type profile. | 90 | 132 | IPR001841 | - | |
Gso9g2178 | 193 | MobiDBLite | consensus disorder prediction | 158 | 172 | - | - | |
Gso9g2178 | 193 | CDD | RING-H2_EL5_like | 89 | 132 | - | - | |
Gso9g2178 | 193 | Pfam | Ring finger domain | 89 | 132 | IPR001841 | - | |
Gso9g2178 | 193 | PANTHER | OS02G0676500 PROTEIN | 1 | 183 | - | - | |
Gso9g2178 | 193 | SUPERFAMILY | RING/U-box | 80 | 139 | - | - | |
Gso9g2178 | 193 | PANTHER | OS11G0150450 PROTEIN | 1 | 183 | - | - | |
Gso9g2178 | 193 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 66 | 142 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso9g2178 | Gso-Chr9 | 46060635 | 46062943 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso9g2178 | 79 | 182 | C3H Transcription Factor Family | AT4G10160 | 38.679 | 5.58e-19 | 79.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso9g2178 | - | - | gmx:100780922 | 394.045 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso18g2011 | 18 | 52693919 | 52696318 | Gso9g2178 | 9 | 46060635 | 46062943 | GST |