Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2173 ATGGCAAGCTCAGAAGAAGCAAAGCTCGAAACTTTCATGCAGTGGCTACAGGCAAATGGGGTGGAGCTACGAGGTTGCAAGATCAAGTGGTGTGATTCCAAACGAGGGTTTGGCATCTTTTCTGATAAAGATGTTTCTGATGGGGTTATGTTGGTTGTTCCACTAGATTTAGCAATTACTCCAATGAGGGTGTTGCAAGATCCTCTTCTAGGACCAGCATGTAGAGCAATGTTTGAAGAAGGAGATGTAGACGACAGGTTATTAATGATGCTGTTACTGACTGTGGAGCGTTTGCGTAAGAATTCTCTATGGAAGCCGTATCTTGATATACTTCCAACCACTTTTGGGAATCCACTTTGGTTTAGTGATGATGAACTTCAAGAGCTAAGAGGAACAACATTATATCGTGCAACTGAGTTGCAGAAGAAAAGCCTGCTTTCTTTGTATGAATCTAAAGTGAAGGATATAGTGAAGAAACTTTTGACTCTTGATGGAAATTCAGAGATTGAGGTGTGCTTTGAAGATTTCCTTTGGGCAAATTCAGTATTTTGGAGCCGTGCTTTGAACATTCCAATGCCTCGTTCTTATGTATTTCCAGAAATGCAAGATGCTCATGACATTTGCATTCGAGAAGCTGATGAAAAAAGGAAGTTAATTGCAGGAAGCCATGTTAAGAAATCTGACAATCAGACCAAAGAAGGGACATGTAACCCAATGACAGGAGACACTGTTTGGGTTGAGGGTCTTGTCCCTGGCATTGACTTTTGTAACCATGATCCGAAGCCAATAGCAACATGGGAAGTTGATGGAACTGGTTTAGCATCGGGAGTTCCTTTCTCCATGTATCTTATCTCTGCTGCTCAAAGTCCCTTGCAGATTGATCAAGAAATCTACATTAGTTATGGAAACAAGGGAAATGAGGAACTTCTATATCTGTATGGTTTTGTCATTGATGATAACACAGATGACTATCTCATGGTCCACTATCCAGCAGAAGCAATTAATACAATTTCTTTTTCTGAGTCCAAAACCCAGCTTCTTGAAGTGCAGAAGGCTGAAATGAGATGTCTTTTACCCAAAACTTCATTGGATAATGGATTTTTTCCATTAAACACCCAAAACAGTGAAGAAAATAACAAGTCCAAAGCTGACAAAGTTTGCAACTATAGTTGGAGTGGTCAGCGCAAGATGCCATCTTATGTTAACAAGCTGGTGTTTCCTGAGAAATTTATGACTACTTTGAGGACCATAGCCATGCAAGAAGATGAGGTTTTCAAGGTTTCCTCAATGCTGGAAGAGCTTGCTGGACCTGAAAGGGAGAGGCAACTATCAGATACAGATGTCCAATCAGCAGTGTGGGAGGTCTGTGGTGATTCTGGAGCTTTACAATCGCTTGTTGATCTTCTTCATGTGAAGATGATGGATCTTGAAGAGAGTTCTGGAACAGAGGAAAATGACCTTGATTTGCTCAAGAAAACCCTTATTATTGATAACCATGAAGATAGCAAACAATGCACGAGCAATTTAAGCACAAAGTCAAATGACTTAGAGGAACCAAAGTTGATGACTAGAAACAAGTGGTCTGCTATAGTATATAGGTTTGGCCAGAAGCAGCTAACTCGGTTATTCTTAGAAGAAGCAGAACATGCTTTGCAGTTATCACTGGGTGAAGAAAAGGTCACTTCTCCCTGTTAA 1695 0.4059 MASSEEAKLETFMQWLQANGVELRGCKIKWCDSKRGFGIFSDKDVSDGVMLVVPLDLAITPMRVLQDPLLGPACRAMFEEGDVDDRLLMMLLLTVERLRKNSLWKPYLDILPTTFGNPLWFSDDELQELRGTTLYRATELQKKSLLSLYESKVKDIVKKLLTLDGNSEIEVCFEDFLWANSVFWSRALNIPMPRSYVFPEMQDAHDICIREADEKRKLIAGSHVKKSDNQTKEGTCNPMTGDTVWVEGLVPGIDFCNHDPKPIATWEVDGTGLASGVPFSMYLISAAQSPLQIDQEIYISYGNKGNEELLYLYGFVIDDNTDDYLMVHYPAEAINTISFSESKTQLLEVQKAEMRCLLPKTSLDNGFFPLNTQNSEENNKSKADKVCNYSWSGQRKMPSYVNKLVFPEKFMTTLRTIAMQEDEVFKVSSMLEELAGPERERQLSDTDVQSAVWEVCGDSGALQSLVDLLHVKMMDLEESSGTEENDLDLLKKTLIIDNHEDSKQCTSNLSTKSNDLEEPKLMTRNKWSAIVYRFGQKQLTRLFLEEAEHALQLSLGEEKVTSPC* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2173 564 Pfam SET domain 36 302 IPR001214 GO:0005515
Gso9g2173 564 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 3 557 - -
Gso9g2173 564 CDD SET_LSMT 32 316 - -
Gso9g2173 564 Gene3D set domain protein methyltransferase, domain 1 5 316 - -
Gso9g2173 564 PANTHER SET DOMAIN-CONTAINING PROTEIN 3 557 - -
Gso9g2173 564 SUPERFAMILY SET domain 8 320 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2173 Gso-Chr9 46012251 46019858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2173 1 376 NAC Transcription Factor Family AT3G56570 25.123 5.76e-10 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gso9g2173 SET 5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2173 - - gmx:100793324 1110.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2005 18 52638399 52645594 Gso9g2173 9 46012251 46019858 GST