Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2159 ATGAGCATGGATATGGCTTGTAGTTTGCCGCAGTCAAGAGTGTTGCATGGAGGTCTGGGGACGAGTTACAGACACAGATCAGTAGGTCAGTTAGGCTGCTTTGATTTTAGAGGGAGAGGTTTTGGTTGTGCTTCTTTTGGGGACTCGAGAAGTGTTTCAAGACTGCAGAGGAGCAGGATGAATGTTTCTGCTTGTTGGAATAATTCAAGAGTGGCTACTGGCAGGGAGTTTAAAGTTTTGAATACGAAGAGAAGTTTGTCTTGTAAGAAGAATAATAATCTTTTCATGGTGTCTCGAGTGATTTGGTCGAAGTGCCAGGGTAATGATTCTTTAGCCTATGTTAATGGCAATGGCCGGAATGTTGATTACGTGGAAGGTTCAGGTGAGGATGTAGGATTGGGGCCTGTTTCTAGTGCTGAACTGGATGCAACTTTGGAAGAAGAAGAAGGGCAAGCGGAGAGGAAAGAGGGAGGGAGTGAAATAGGATTAGAGGAACTGAGTGTGGATGAACTGAAAGAACTATTGCAAAAGGCCTTAAAGGAGCTAGAAGTAGCTCAAATAAATAGTACCATGTTTGAGGAAAAGGTTAAAAAAATATCAGAGACTGCCATTTCTTTGCATGATGAAGCAGTCAATTCTTGGAACAATGTTAATTCTACCCTTGGCACCATCCAAGAAATAGCAAATGAAGAACATACAGCCAAAGAAGTTGTACAAAATGCAACAATGGCTCTTTCATTAGCTGAGGCAAGGCTTCAAGTAGCCATAGAATCTTTGGAGGCTGCAAAAGAAGTTCCTGATTCAGCACAAGGTTCTAATGAGAACAGTGGTGATAAGGACACGGTGGATGAGGAGCAAGCTCTTTTGGTTGCTAAAGAAGATATCAAGGAATGCCAGGCTAATTTAGCCAATTGTGAGGCAGAGCTGAGGCATTTGCAAGATAGAAAGGAGGAGTTGCAGAAGGAAGTGAGCAAATTGCAAGAAATTGCTGAAAAGGCTCAGCTGAATGCGGTGAAAGCTGAAGAGGATGTTACAAACATAATGCTTTTGGCAGAGCAAGCTGTCGCCTTTGAACTTGAGGCTACAAAACTTGTAAATGATGCAGAGATTGCCCTACAGCGAGCAGATAAGTCTAATTCTAATTCAAATGCTGATACCATAGAATCTACACAAGCACAAGATGTTGTTGTGGCTGTTCCTGAAGAGGAGAAAGTGGTTCAAGGTTTTTCTGGTGATGTTGAAAGAGACAGAGATTTGGCAATTGACGACGAATCTGTGCTTGCCAATTTATCACCTGAAACACTATCTGATAAAACCAGCCAAGTTTTGGAAGACAAAACACAGTCTGATTATTTAAGTGATAATGAGAATGCTGTGCAAACAAAAAAGCAGGAAATACAGAAAGATTTGACCAGAGATAGTTCACTAGCTCCCAAGGCATTATTGAAAAAGTCTTCTCGATTCTTTTCTGCATCATTCTTCTCTTCTGCTGAAGATGGGACTGAGTTCACACCCGCATCAGTCTTCCAGAGCTTTGTATTATCTGTACAGAAGCAGTTGCCCAAGCTGATATTTGGGTTATTGTTAATGGGAGCAGGGGTTGCCTTCTATTCTAATAGAGTGGAGAGGAATGCTCAGCTGCTTACACAGGCAGATGTTATTATGACCAGTGTTGAAGAAGTTTCCTCTAGTGCAAAGCCTCTGTTTAGACAACTTCAGAAACTCCCCAAGAAAATCAAGAAAATCATTGCATCATTACCTCATCAAGAGGTGAACGAGGAAGAAGCCTCCCTCTTTGACATCCTCTGGTTATTACTTGCAAGTGTTATATTTGTGCCAATATTTCAAAAAATCCCTGGAGGCAGTCCTGTTCTTGGCTACTTGGCTGCCGGTATCTTGATTGGGCCTTATGGTCTCTCTATCATTCGTCACGTTCATGGGACAAAAGCAGTAGCTGAATTTGGAGTTGTTTTTCTTCTATTCAATATTGGCCTGGAGCTCTCTGTTGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCTGCACAGGTGTTGGCAACTGCTGTAGCTGTCGGCTTGATGGCTCATTATATTTGCGGCCAAGCTGGTCCCGCTGCTATTGTCATTGGGAATGGCCTAGCATTATCATCCACTGCTGTTGTTCTGCAGGTGTTGCAGGAGAGAGGCGAGAGCACTTCACGGCATGGCCGAGCTACTTTTTCTGTGTTACTTTTTCAGGATCTGGCTGTCGTGGTCTTGCTAATACTCATACCTCTTATTTCTCCTAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCTATTGCTGAAGCACTTGGACTGGCTGCTGTTAAGGCAGCAGTTGCCATCACTGCTATAATTGCAGGGGGACGTTTGCTCCTTCGACCAATATACAAGCAGGTTGCAGAAAATCAAAATGCAGAAATTTTCTCAGCCAATACACTCCTTGTTATTCTTGGCACAAGTCTTCTTACAGCCAGAGCAGGACTTTCCATGGCATTGGGAGCATTTTTGGCTGGTTTACTACTGGCAGAAACTGAATTTTCCTTACAGGTTGAATCTGATATTGCTCCTTATCGTGGCCTTCTTTTGGGGCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTTTCAAACTTCCCAGTCATTACGGGCACACTAGGACTCTTAATATGTGGCAAGACTATCTTGGTTTGTTTGATAGGTAGAATGTTTGGGATTTCACTCATTTCTGCCATCAGAGTTGGTCTACTTCTTGCTCCTGGTGGGGAGTTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGCTGTCATCTTTGCTGTTTCTTGTTGTGGGCATTTCAATGGCCATCACACCATGGCTAGCTGCAGGAGGCCAGCTGATTGCTTCCCGCTTTGAGCAGAATGATGTTAGAAGTTTATTACCTGTAGAAAGTGAGACAGATGATCTGCAAGATCATATAATTATTTGTGGATTTGGACGAGTTGGCCAGATCATTGCCCAACTTCTTTCAGAGCGTCTTATTCCATTTGTCGCACTAGATGTAAGAAGTGATAGAGTGGCAGTTGGGCGTGCTTTGGATCTCCCTGTGTACTTTGGAGATGCTGGTAGTAGAGAGGTCCTACATAAGGTTGGGGCTGAAAGGGCATGTGCTGCAGCAATAACTCTTGATACGCCTGGTGCAAATTATAGAACAGTTTGGGCTTTAAGCAAGTACTTCCCAAATGTGAAGACTTTTGTTCGTGCCCATGACGTTGATCATGGATTGAATTTAGAAAAGGCTGGAGCTACTGCTGTTGTCCCAGAGACCTTGGAACCAAGTCTTCAACTAGCAGCTGCTGTGCTTTCTCAGGCTAAACTCCCTACGTCGGAGATTGCAGCTACTATAAATGAATTCAGATCTCGACATCTGGCTGAGCTCACTGAGCTGTGTGAAGCAAGTGGAAGTTCTCTTGGTTATGGATTTAATAGAATTATGAACAAACCCAAATCTCCATCCCCAGATTCATTAGATGAGACCCCTGTCTCCGAAGGGACACTAGCAATATGA 3609 0.4317 MSMDMACSLPQSRVLHGGLGTSYRHRSVGQLGCFDFRGRGFGCASFGDSRSVSRLQRSRMNVSACWNNSRVATGREFKVLNTKRSLSCKKNNNLFMVSRVIWSKCQGNDSLAYVNGNGRNVDYVEGSGEDVGLGPVSSAELDATLEEEEGQAERKEGGSEIGLEELSVDELKELLQKALKELEVAQINSTMFEEKVKKISETAISLHDEAVNSWNNVNSTLGTIQEIANEEHTAKEVVQNATMALSLAEARLQVAIESLEAAKEVPDSAQGSNENSGDKDTVDEEQALLVAKEDIKECQANLANCEAELRHLQDRKEELQKEVSKLQEIAEKAQLNAVKAEEDVTNIMLLAEQAVAFELEATKLVNDAEIALQRADKSNSNSNADTIESTQAQDVVVAVPEEEKVVQGFSGDVERDRDLAIDDESVLANLSPETLSDKTSQVLEDKTQSDYLSDNENAVQTKKQEIQKDLTRDSSLAPKALLKKSSRFFSASFFSSAEDGTEFTPASVFQSFVLSVQKQLPKLIFGLLLMGAGVAFYSNRVERNAQLLTQADVIMTSVEEVSSSAKPLFRQLQKLPKKIKKIIASLPHQEVNEEEASLFDILWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAVAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATAVAVGLMAHYICGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPVITGTLGLLICGKTILVCLIGRMFGISLISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMAITPWLAAGGQLIASRFEQNDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLSQAKLPTSEIAATINEFRSRHLAELTELCEASGSSLGYGFNRIMNKPKSPSPDSLDETPVSEGTLAI* 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2159 1202 Gene3D - 594 982 IPR038770 -
Gso9g2159 1202 Gene3D - 1002 1166 - -
Gso9g2159 1202 Coils Coil 288 343 - -
Gso9g2159 1202 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 3 1202 - -
Gso9g2159 1202 Coils Coil 168 188 - -
Gso9g2159 1202 Pfam Sodium/hydrogen exchanger family 602 974 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso9g2159 1202 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 605 885 IPR004771 GO:0006812|GO:0008324|GO:0016021
Gso9g2159 1202 Coils Coil 245 265 - -
Gso9g2159 1202 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 3 1202 - -
Gso9g2159 1202 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1003 1144 IPR036291 -
Gso9g2159 1202 MobiDBLite consensus disorder prediction 1182 1202 - -
Gso9g2159 1202 ProSiteProfiles RCK N-terminal domain profile. 1006 1128 IPR003148 GO:0006813
Gso9g2159 1202 Pfam TrkA-N domain 1007 1120 IPR003148 GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2159 Gso-Chr9 45863348 45876985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2159 3 1202 Inorganic Solute Cotransporters AT4G00630 67.176 0.0 1442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2159 - - gmx:100818163 2156.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1988 18 52480774 52495166 Gso9g2159 9 45863348 45876985 GST
Gso9g2159 9 45863348 45876985 Gso7g0644 7 6849171 6860141 PCT
Gso9g2159 9 45863348 45876985 Gso3g0115 3 1382630 1395042 PCT
Gso7g0644 7 6849171 6860141 Gso9g2159 9 45863348 45876985 PCT
Gso3g0115 3 1382630 1395042 Gso9g2159 9 45863348 45876985 PCT