Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso9g2143 | ATGGCAACTGATATGCAGAGGCTTGTTGGAACCAGTGAGGATGATGAAGAAATGGGAATGGATGTGAAAGATGAGGATGATGAGGATGATGATTATGAGGAAAATGGAGGTGAACAGGGGAATGCTTCAGTATCAGGGATGGTAGAGATTGATGATGGGAATGGGATAGGAACTGCCACTGGTGACAACAGGTTTCAGCAGCACCAGCAGTTTCAAGAGCAAGTAGGCACCCCGGGTGGAGGTACTCGAAGATCTAGGCCGCTAGAAGAGAAAGAGAGAACAAAGCTAAGAGAAAGGCGCCGGAGGGCCATCACTGCAAGGATCTTGGCAGGGCTTCGCAGGCATGGCAACTACAATCTAAGAGTTAGGGCTGACATAAATGATGTCATTGCTGCTCTAGCAAGGGAAGCTGGATGGGTGGTTCTTCCAGATGGTTCTACTTTCCCATCAAGATCTCAGGGTCAAAAGCCAGCTGGTGGTAATTCTACAATTGTCACTTCATCATCTTCCCTTGCGGCTTCACAACAGACTCCATCTGCTTCTCTCAGGGGAGTTGCTTCTGGCTATAGGAGCCCTTTAGAGTATAATGCATGTCAAACAAAAGGTGTTTTTATGCCTACTCCGTCTCCTTATGATCTATCCTCAAGTTCCCGGTCTCAAACATCTATGGTGGGGGATGGAGAAGCACAAAGAGACAATCGTCCTCTGATTGCTGGTTCAATGGATAATGCTGATGATAAGCAGATTGCTGACTTGCCCCCCAGATTACCAGAGCGTGATTTGGCTGGTACCCCATATGTTCCAGTTTATGTGATGCTATCGTTGGGGGTGATCAATATTAAATGTGAGCTTGTTGATCCCGATGGTCTACTAAAGCAGCTAAGGGTGTTGAAATCAGTACATGTTGATGGTGTTATGGTAGACTGTTGGTGGGGAATAGTGGAGGCACATGCTCCACAAGAGTATAATTGGAATGGTTACAAGAGACTCTTTCAAATGGTGCGAGAGCTTAAGCTTAAGCTGCAGGTTGTAATTTCATTTCATGAATGTGGAGGCAATTTTGGCGATGATGTTTGTATTCCACTACCGCATTGGGTTGCTGAAATTGGTCGGAGCAATCCTGACATTTTTTTCACTGATAAAGAGGGAAGACACAACCCTGAATGTCTTTCTTGGGGAATAGATAAGGAACGAGTTTTAAGAGGCCGTACTGCTGTGGAGGTTTACTTTGATTTCATGAGAAGTTTCCGGGTAGAGTTTGATGAATACTTTGAGGATGGGTTTATCTCCATGATTGAAATTGGACTGGGTCCATGTGGAGAGTTAAGATACCCATCTTGTCCTGTAAAGCATGGTTGGAGATATCCTGGTGTTGGTGAATTCCAGTGCTATGATCAGTATATGTTGAAAAGTCTTAGGAAAGCAGCAGAAGTAAGGGGCCATTCTATTTGGGCTAGAGGGCCAGATAATGCTGGTACCTATAATTCTCAGCCACATGAAACAGGTTTCTTTTGTGATGGGGGTGATTATGATGGCTTCTATGGCAGGTTTTTTCTTAGCTGGTACTCTCAGGTTTTAGTTGATCATGGAAACCGGGTACTTTCTCTGGCAAAATTAGCTTTTGAGGGATCTTGCATTGCTGCAAAGTTATCGGGTATTTATTGGTGGTACAAGACTGCAAGTCATGCTGCTGAATTAACTGCTGGGTATTATAACCCATGCAATCGTGATGGTTATGCTGCAATTATGACAATGTTAAAGACAATTGGAGTCAGCTTAAACATTCCTTGTGTTGACTTGCACACATTTAACCAACAACATGAGGGCTTTCCAGAGACATTTGCAGATCCTGAGGGAATAGTCTGGCAATTGTTGAATGCCGGGTGGGATGTTGACCTACCAGTTACCGGTCAGAATGGATTTCCTTGCCTAAACAGAGTTGGCTATAACAAGGTTTTGGATAATGCCAAGCCCATGAATGATCCAGATGGAAGGCTCTTTTCATCCTTTACTTACCTGAGGCTTAGTCCACTTCTTATGGAACAACAAAACTTTGTAGAGTTTGAACGATTTGTCAAGAGAATGCATGGGGAAGCTGTTCTTGATCTACAGGTATAA | 2118 | 0.4405 | MATDMQRLVGTSEDDEEMGMDVKDEDDEDDDYEENGGEQGNASVSGMVEIDDGNGIGTATGDNRFQQHQQFQEQVGTPGGGTRRSRPLEEKERTKLRERRRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGSTFPSRSQGQKPAGGNSTIVTSSSSLAASQQTPSASLRGVASGYRSPLEYNACQTKGVFMPTPSPYDLSSSSRSQTSMVGDGEAQRDNRPLIAGSMDNADDKQIADLPPRLPERDLAGTPYVPVYVMLSLGVINIKCELVDPDGLLKQLRVLKSVHVDGVMVDCWWGIVEAHAPQEYNWNGYKRLFQMVRELKLKLQVVISFHECGGNFGDDVCIPLPHWVAEIGRSNPDIFFTDKEGRHNPECLSWGIDKERVLRGRTAVEVYFDFMRSFRVEFDEYFEDGFISMIEIGLGPCGELRYPSCPVKHGWRYPGVGEFQCYDQYMLKSLRKAAEVRGHSIWARGPDNAGTYNSQPHETGFFCDGGDYDGFYGRFFLSWYSQVLVDHGNRVLSLAKLAFEGSCIAAKLSGIYWWYKTASHAAELTAGYYNPCNRDGYAAIMTMLKTIGVSLNIPCVDLHTFNQQHEGFPETFADPEGIVWQLLNAGWDVDLPVTGQNGFPCLNRVGYNKVLDNAKPMNDPDGRLFSSFTYLRLSPLLMEQQNFVEFERFVKRMHGEAVLDLQV* | 706 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso9g2143 | 705 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 81 | 220 | IPR008540 | - | |
Gso9g2143 | 705 | MobiDBLite | consensus disorder prediction | 146 | 183 | - | - | |
Gso9g2143 | 705 | MobiDBLite | consensus disorder prediction | 17 | 36 | - | - | |
Gso9g2143 | 705 | MobiDBLite | consensus disorder prediction | 59 | 79 | - | - | |
Gso9g2143 | 705 | PANTHER | BETA-AMYLASE | 78 | 705 | - | - | |
Gso9g2143 | 705 | MobiDBLite | consensus disorder prediction | 209 | 227 | - | - | |
Gso9g2143 | 705 | MobiDBLite | consensus disorder prediction | 1 | 97 | - | - | |
Gso9g2143 | 705 | Gene3D | Glycosidases | 258 | 704 | - | - | |
Gso9g2143 | 705 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 301 | 315 | IPR001554 | GO:0000272|GO:0016161 | |
Gso9g2143 | 705 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 322 | 340 | IPR001554 | GO:0000272|GO:0016161 | |
Gso9g2143 | 705 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 344 | 365 | IPR001554 | GO:0000272|GO:0016161 | |
Gso9g2143 | 705 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 437 | 459 | IPR001554 | GO:0000272|GO:0016161 | |
Gso9g2143 | 705 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 510 | 529 | IPR001554 | GO:0000272|GO:0016161 | |
Gso9g2143 | 705 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 544 | 560 | IPR001554 | GO:0000272|GO:0016161 | |
Gso9g2143 | 705 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 561 | 572 | IPR001554 | GO:0000272|GO:0016161 | |
Gso9g2143 | 705 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 579 | 602 | IPR001554 | GO:0000272|GO:0016161 | |
Gso9g2143 | 705 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 620 | 642 | IPR001554 | GO:0000272|GO:0016161 | |
Gso9g2143 | 705 | Pfam | Glycosyl hydrolase family 14 | 270 | 691 | IPR001554 | GO:0000272|GO:0016161 | |
Gso9g2143 | 705 | PRINTS | Plant beta-amylase signature | 427 | 436 | IPR001371 | GO:0000272|GO:0016161 | |
Gso9g2143 | 705 | PRINTS | Plant beta-amylase signature | 671 | 685 | IPR001371 | GO:0000272|GO:0016161 | |
Gso9g2143 | 705 | PRINTS | Plant beta-amylase signature | 686 | 700 | IPR001371 | GO:0000272|GO:0016161 | |
Gso9g2143 | 705 | SUPERFAMILY | (Trans)glycosidases | 263 | 701 | IPR017853 | - | |
Gso9g2143 | 705 | PANTHER | - | 78 | 705 | IPR001554 | GO:0000272|GO:0016161 | |
Gso9g2143 | 705 | MobiDBLite | consensus disorder prediction | 206 | 233 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso9g2143 | Gso-Chr9 | 45720594 | 45726909 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso9g2143 | 1 | 702 | Glycoside Hydrolase | AT2G45880 | 64.922 | 0.0 | 931 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | BES1 | Gso9g2143 | Glyco_hydro_14 | 1.5e-99 | CL0058 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso9g2143 | K01177 | - | gmx:100812659 | 1322.76 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso18g1974 | 18 | 52316045 | 52322498 | Gso9g2143 | 9 | 45720594 | 45726909 | GST |