Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2133 ATGGATGAAGATAAAACCCAACAACTTCCCAGAAGAATGACCAGGTCTTCAGCTTCATCGTCTCCATCCACTTCAAATAACATAGTTGCAGCAAAAGTAACTAGCCTTGAACCTCTAACAATCAATGACCTTTTAGTTGGGGGAGATCCCATCAGCCTAGATGACATAATTTCTAGCTTTCCTGGTAGAAGTAGCCAGATTCTTGAAGTTGTGCGTCATTTGGGACCTTTGAATTCACCAATGCTTCCTTTGTTCGTATATGGAAGTTCTTCTACCGGAAAAACCAGTATCATTCTTCAATTATTCAGGCATCTCAACAGGCCTATTGTTTTTTCTAGTTGTAGGACATGTTATAACCAGAACATCTTGTTTGAATCTATTCTAAATCAGCTACTTCTCCACAGAAAAAATGCTGCCAATGGTTATTTGAATGCAAAACGCTGTGAAAGACCATCTGATTTTGTCAATTTTCTTCTAGAAGCATTGACCAATGTTATAAGCAATCTGAAGGAGAAGTCAGAGAAGTTGATCTCAAATGAAATGACTCAAGGGAAAATTGGAAATATGATCTACTTGGTATTTGACAATTTTCAGCTTGTTAGGGAGTGGGATAAGAGTTCTACTATATTGCCCTTGCTGTTTAATCTCTATGATCTGCTAAATACGCCTGAGGTGGGTTTGATTTTTATCAGCAGTACTTCTCCAGATACCTTTTACTCTAACATGGGCTATGTTGAGCCTATCCCCATTTACTTTCCTGATTACACAGAAGAAGATATTCGTCAAATATTATTGAGAAACCAAGTGAACCAGAAGCGATATTCCTCATTTCTGGATGTATCTCTGAAATCTTTCTGTGGAATTACTAAGCAGATTGATGATTTATCTGCTGCCTTAAAGCCACTATATGAAAAATATTGTGAACCTTTAAGTGATAAGGGAAAGGGAGTTGCTCCTAATCAAGAAATGAAGCGAAGGCTGCTTGCTCATATCAACCCTCATATTGCCTCCTCTTTGAATGAGATATTTAAGGTTTCATCTCTTTCTTCAACTGAAGTTGAGACCCGTAAAGAGGAAAAGTGGAAGGGAAATCTTAGGAGATTGGAGCAATCTAAAGAGCTTGTCAGTCTTGATTTTCATATATCTACTAGTGCAAAGTATCTTCTGATTTCAGCATTCCTTGCCTCCAGAAACCCAGCAACTCTTGATGCTTCACTTTTTGATTCCAAAGGTGGTTCTGATAATCGGAAACGAAAGAGGAAGCCCTCTGAGAAAGCGCAGGAACGGAAGGAAACTTTAGAACAGGAACTACTAATGAAAGGACCCGGAACTTTCCCATTGGAGAGGTTGTTAGCCATCTTTCAATGCCTTGTATCAGTTGCAGAAGAACCATCCGACGAGGAGGAACAAAATAATGATGGATTAGGAGTTGAAGGTGGCAATGGTGGACTGATGTCTGACATTCTTTTGCAGCTATCCAGTCTCTGCAATTCTAATTTTATATTTAAAGGAAGAAGCTGTCCCATTGAAGGCTCAACCCGGTATCGATCAACCATATCTGAAGACCTTGCTTTGAAGGTTGCAAGGAGCTTAGAGTTCCCATTATCAAAGTATTTGTATAGAAGTTAG 1629 0.3904 MDEDKTQQLPRRMTRSSASSSPSTSNNIVAAKVTSLEPLTINDLLVGGDPISLDDIISSFPGRSSQILEVVRHLGPLNSPMLPLFVYGSSSTGKTSIILQLFRHLNRPIVFSSCRTCYNQNILFESILNQLLLHRKNAANGYLNAKRCERPSDFVNFLLEALTNVISNLKEKSEKLISNEMTQGKIGNMIYLVFDNFQLVREWDKSSTILPLLFNLYDLLNTPEVGLIFISSTSPDTFYSNMGYVEPIPIYFPDYTEEDIRQILLRNQVNQKRYSSFLDVSLKSFCGITKQIDDLSAALKPLYEKYCEPLSDKGKGVAPNQEMKRRLLAHINPHIASSLNEIFKVSSLSSTEVETRKEEKWKGNLRRLEQSKELVSLDFHISTSAKYLLISAFLASRNPATLDASLFDSKGGSDNRKRKRKPSEKAQERKETLEQELLMKGPGTFPLERLLAIFQCLVSVAEEPSDEEEQNNDGLGVEGGNGGLMSDILLQLSSLCNSNFIFKGRSCPIEGSTRYRSTISEDLALKVARSLEFPLSKYLYRS* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2133 542 MobiDBLite consensus disorder prediction 1 25 - -
Gso9g2133 542 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 250 539 IPR020796 GO:0000808|GO:0005634|GO:0006260
Gso9g2133 542 MobiDBLite consensus disorder prediction 11 25 - -
Gso9g2133 542 Pfam AAA ATPase domain 60 222 IPR041664 -
Gso9g2133 542 Gene3D - 60 241 IPR027417 -
Gso9g2133 542 MobiDBLite consensus disorder prediction 405 430 - -
Gso9g2133 542 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 52 541 IPR020796 GO:0000808|GO:0005634|GO:0006260
Gso9g2133 542 Coils Coil 159 179 - -
Gso9g2133 542 MobiDBLite consensus disorder prediction 410 430 - -
Gso9g2133 542 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 267 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2133 Gso-Chr9 45614944 45618497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2133 3 541 Core DNA Replication Machinery Family AT4G29910 57.222 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2133 K02607 - gmx:100782175 1021.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1965 18 52158012 52161927 Gso9g2133 9 45614944 45618497 GST