Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2129 ATGGGTTATCTGAGCAAAGCTTCCAAAACCCTAAGGCAATCGAATTACCTATCGTTGTTGTGCAATTCCAATTTCAATTTCAATCCATTAACGAACAGAATAACCCATGAACGTTTTTCTGTGACGCGTGCACTGTTGTGTTCCCAGACACGCCAAAACAGCACCACGAGAGAGAAAAGCACCATAGATTTGAGCCAATATCCAAAAGAGCTCGTTAGAAACTTCTCAATCATTGCACACGTTGATCATGGCAAGTCCACACTCGCTGATCGGCTTCTAGAACTCACTGGAACCATTAAGAAAGGCCACGGCCAACCCCAGTATCTTGATAAACTGCAGGTGGAGAGAGAAAGAGGAATCACAGTTAAAGCCCAGACAGCAACAATGTTTTATAAGCACGGTGTAAATGGTGATGATTGCAGTGATGGAAAGGAGTCACCTAAGTTCTTGCTGAATCTTATTGACACTCCTGGACATGTTGACTTTAGTTATGAGGTGTCCAGGTCACTGGCAGCTTGTCAGGGTGTGCTTTTGGTTGTCGATGCTGCTCAGGGAGTCCAAGCACAAACTGTTGCTAACTTTTACCTTGCCTTTGAGTCTAACCTAACAATTGTTCCTGTCATAAACAAGATTGACCAGCCAACTGCTGATCCTGATCGCGTTAAAGCCCAATTGAAATCAATGTTTGATCTTGACCCAAGTGATGTGCTGCTAACATCTGCTAAAACTGGAGAGGGTCTTCAGCAAATCCTTCCAGCAGTCATAGAGCGCATACCTGCCCCTCCTGGGAGGAGTGATTCTCCTTTACGCATGCTTTTGCTTGATTCATATTACGATGAATACAAAGGGGTAATATGTCATGTTGCTGTTGTTGATGGTGTCCTGCGCAAGGGGGATAAGATTTCTTCTGCAGCTACTGGTCAGTCATATGAAGCTTCAGATATAGGCATCATGCATCCTGAACTTACACCTACTGGAATCTTGCTTACTGGACAAGTTGGTTATGTTGTAAGTGGCATGCGTTCAACTAAAGAGGCACGTGTTGGTGATACAATTTATCATACTCGAAGTACTGTAGAGCCTCTTCCAGGCTTCAAGCCAGCAAAACATATGGTGTTCTCTGGCCTTTATCCAGCTGATGGATCTGATTTTGAAGCTCTAAATCATGCAATAGAGAGGCTGACATGCAATGATGCCAGTGTCTCTATTGCTAAAGAAACTAGCACTGCTCTAGGTCTGGGGTTCAGGTGTGGGTTTTTAGGCCTTCTGCACATGGATGTTTTTCATCAACGGCTTGAACAGGAGTATGGAGCTCATGTTATATCAACTGTTCCTACTGTGCCTTATATATTTGAGTTTCATGATGGAAGCAAGTTAGAAGTTCAGAATCCCGCTTCATTACCCTCTAATCCTAAGCATAAAGTGACAGCCTGTTGGGAACCTACAGTATTAGCTACTATAATCATTCCTAGTGAGTATGTGGGACCTGTTATTACCCTTGTCTCTGAGCGTAGGGGTCAGCAGTTGGAGTACTCATTCATCGACAGTCAACGGGTATTCATGAAGTACCGCCTGCCTTTGAGAGAAATTGTTGTTGACTTTTATAATGAATTGAAGAGCATAACATCAGGCTATGCATCATTTGATTATGAGGACTCAGATTATCAACAAGCTGATATGGTGAAACTGGATATTCTCTTGAATGGACAACCTGTTGATGCAATGGCTACCATAGTTCATAGCGCAAAAGCATATCGTGTTGGGCGTGAACTGACAGAGAAATTGAAGGGCGTCTTAGACAGGCAAATGTTCGAGGTAAACATACAAGCCGCCATTGGGTCAAAAATCATAGCAAGAGAGACGATTTCCGCTATGAGGAAAAATGTTCTTGCCAAGTGTTATGGTGGTGATATTACTCGAAAAAGGAAGCTATTGGAGAAGCAAAAGGAAGGAAAGAAGCGAATGAAACGTGTTGGTTCTGTTGATATACCACAAGAAGCATTTCACGAACTATTAAAGGTTTCTTAG 2028 0.429 MGYLSKASKTLRQSNYLSLLCNSNFNFNPLTNRITHERFSVTRALLCSQTRQNSTTREKSTIDLSQYPKELVRNFSIIAHVDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYKHGVNGDDCSDGKESPKFLLNLIDTPGHVDFSYEVSRSLAACQGVLLVVDAAQGVQAQTVANFYLAFESNLTIVPVINKIDQPTADPDRVKAQLKSMFDLDPSDVLLTSAKTGEGLQQILPAVIERIPAPPGRSDSPLRMLLLDSYYDEYKGVICHVAVVDGVLRKGDKISSAATGQSYEASDIGIMHPELTPTGILLTGQVGYVVSGMRSTKEARVGDTIYHTRSTVEPLPGFKPAKHMVFSGLYPADGSDFEALNHAIERLTCNDASVSIAKETSTALGLGFRCGFLGLLHMDVFHQRLEQEYGAHVISTVPTVPYIFEFHDGSKLEVQNPASLPSNPKHKVTACWEPTVLATIIIPSEYVGPVITLVSERRGQQLEYSFIDSQRVFMKYRLPLREIVVDFYNELKSITSGYASFDYEDSDYQQADMVKLDILLNGQPVDAMATIVHSAKAYRVGRELTEKLKGVLDRQMFEVNIQAAIGSKIIARETISAMRKNVLAKCYGGDITRKRKLLEKQKEGKKRMKRVGSVDIPQEAFHELLKVS* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2129 675 SUPERFAMILY EF-G C-terminal domain-like 479 573 IPR035647 -
Gso9g2129 675 Gene3D - 445 558 - -
Gso9g2129 675 TIGRFAM lepA: elongation factor 4 72 674 IPR006297 GO:0005525
Gso9g2129 675 Gene3D - 70 263 IPR027417 -
Gso9g2129 675 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 70 262 IPR000795 GO:0003924|GO:0005525
Gso9g2129 675 CDD EF4_II 269 354 - -
Gso9g2129 675 Pfam Elongation factor G C-terminus 480 564 IPR000640 -
Gso9g2129 675 Gene3D - 559 633 IPR038363 -
Gso9g2129 675 SUPERFAMILY EF-G C-terminal domain-like 371 448 IPR035647 -
Gso9g2129 675 PRINTS GTP-binding elongation factor signature 74 87 IPR000795 GO:0003924|GO:0005525
Gso9g2129 675 PRINTS GTP-binding elongation factor signature 117 125 IPR000795 GO:0003924|GO:0005525
Gso9g2129 675 PRINTS GTP-binding elongation factor signature 152 162 IPR000795 GO:0003924|GO:0005525
Gso9g2129 675 PRINTS GTP-binding elongation factor signature 204 213 IPR000795 GO:0003924|GO:0005525
Gso9g2129 675 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 283 IPR027417 -
Gso9g2129 675 CDD EF4_III 370 445 - -
Gso9g2129 675 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 110 125 IPR031157 -
Gso9g2129 675 CDD LepA 73 261 - -
Gso9g2129 675 CDD lepA_C 480 559 IPR035654 -
Gso9g2129 675 Gene3D Translation factors 265 362 - -
Gso9g2129 675 Hamap Elongation factor 4 [lepA]. 68 675 IPR006297 GO:0005525
Gso9g2129 675 Pfam Elongation factor Tu GTP binding domain 72 259 IPR000795 GO:0003924|GO:0005525
Gso9g2129 675 TIGRFAM small_GTP: small GTP-binding protein domain 76 250 IPR005225 GO:0005525
Gso9g2129 675 Gene3D Elongation Factor G (Translational Gtpase), domain 3 363 444 - -
Gso9g2129 675 PANTHER TRANSLATION FACTOR GUF1, MITOCHONDRIAL 58 673 - -
Gso9g2129 675 SUPERFAMILY Translation proteins 260 357 IPR009000 -
Gso9g2129 675 Pfam GTP-binding protein LepA C-terminus 567 673 IPR013842 -
Gso9g2129 675 PANTHER TRANSLATION FACTOR GUF1-RELATED 58 673 IPR006297 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2129 Gso-Chr9 45575611 45582366 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2129 69 213 Eukaryotic Initiation Factors Gene Family AT1G56070 40.136 8.89e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2129 K21594 - gmx:100781092 1315.83