LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso9g2108	ATGTCAATCTTCGACGGAGCTTTCATGAACACGCAACTCTCCAAGCACACTTCGATCTTCGGCCTCCGTCTCTGGGTCGTGATCGGAATCCTCATTGGAGTCTTCATCGTCTTCACGCTCTTCCTCCTCTCCCTCTGCCTCGTCTCTCGCCGGAACCGCCGCCGCTCCGTCGCCGTCCCCGGCTACAAGGTCACCGGAGACGCCGACGCGGCGAAGGACATCCACACGATCGTGCACCTTCCCGGGCCCCACATGCTCCGGCCGGTGGCGCCGGAGATCCACGTGGAGATGGGGAAGAAGACGGAGCACCGGGTGGTGGTGCAGTGCGATGGGGTTTCGAGCGAGGAGAGTAAGGTGACGGTGGGGAGTGGGTGTGAAACGACGTCGTCTTTTGGAAGTGGGAGTGTTGGTGGGCCTGGGCTTGGGTCTGGGCCTGGGCTTGGGCCTGAGGTTTCACATCTCGGATGGGGGAGATGGTACACTCTGAGGGAGCTTGAGGATGCCACTGGAGGATTGAGCCCTGAAAATGTGGTTGGTGAAGGTGGCTACGGAATTGTCTATCATGGAGTACTCAATGATGGTACCAAAATTGCTGTCAAGAACCTCTTGAATAACAAGGGACAAGCTGAGAAAGAATTTAAAATAGAGGTAGAAGCAATTGGTCGAGTGCGACACAAAAATCTTGTTAGGCTGCTTGGATACTGTGTTGAGGGAGCCTACAGGATGCTTGTGTATGAGTATGTAGACAATGGCAATCTAGAGCAATGGCTGCATGGGGACGTTGGAGCTGTAAGCCCTTTGACATGGAACATACGGATGAACATTATATTGGGAACTGCAAGAGGATTGGCCTATCTTCATGAGGGTCTTGAACCGAAAGTTGTCCACCGAGATGTGAAATCAAGTAACATACTTATTGATCGCCAATGGAACTCCAAGGTTTCCGATTTTGGACTTGCTAAGCTTTTGTGTTCTGAGAATAGTTACGTCACAACTCGAGTGATGGGGACATTTGGTTATGTTGCACCAGAATATGCATGCACTGGAATGCTGACTGAGAAGAGTGATATTTATAGCTTTGGGATACTTATCATGGAGATAATCACCGGAAGAAGTCCTGTTGATTATAGTAGACCGCAAGGAGAGGTTAATTTAATAGAATGGTTGAAGACTATGGTTGGGAATCGAAAATCCGAGGAAGTAGTTGATCCTAAGCTCCCTGAGATGCCATTTTCAAAGGCTCTTAAACGTGCTTTGTTGATTGCTCTTCGGTGTGTTGATCCTGATGCAACAAAGAGGCCAAAAATGGGACATGTGATACACATGCTTGAGGCAGACGACCTGTTATTCCATACTGAACAAAGAACTGAGGGAGAGTCTTCCCGTTCCTATCAAAGTGAGCACAAGGACTCAAATTTAGATAAGAGAACAGGTGGAGGTGTCATTGATAAAAGTGAAGATGCTAGTACTAGATGGAGATGA	1482	0.4912	MSIFDGAFMNTQLSKHTSIFGLRLWVVIGILIGVFIVFTLFLLSLCLVSRRNRRRSVAVPGYKVTGDADAAKDIHTIVHLPGPHMLRPVAPEIHVEMGKKTEHRVVVQCDGVSSEESKVTVGSGCETTSSFGSGSVGGPGLGSGPGLGPEVSHLGWGRWYTLRELEDATGGLSPENVVGEGGYGIVYHGVLNDGTKIAVKNLLNNKGQAEKEFKIEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGAVSPLTWNIRMNIILGTARGLAYLHEGLEPKVVHRDVKSSNILIDRQWNSKVSDFGLAKLLCSENSYVTTRVMGTFGYVAPEYACTGMLTEKSDIYSFGILIMEIITGRSPVDYSRPQGEVNLIEWLKTMVGNRKSEEVVDPKLPEMPFSKALKRALLIALRCVDPDATKRPKMGHVIHMLEADDLLFHTEQRTEGESSRSYQSEHKDSNLDKRTGGGVIDKSEDASTRWR*	494

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gso9g2108	493	Gene3D	Phosphorylase Kinase; domain 1	156	247	-	-
Gso9g2108	493	SUPERFAMILY	Protein kinase-like (PK-like)	150	444	IPR011009	-
Gso9g2108	493	ProSitePatterns	Protein kinases ATP-binding region signature.	178	200	IPR017441	GO:0005524
Gso9g2108	493	Gene3D	Transferase(Phosphotransferase) domain 1	248	460	-	-
Gso9g2108	493	PANTHER	BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE	1	492	-	-
Gso9g2108	493	SMART	serkin_6	172	450	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Gso9g2108	493	Pfam	Protein kinase domain	175	441	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Gso9g2108	493	ProSiteProfiles	Protein kinase domain profile.	172	449	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Gso9g2108	493	MobiDBLite	consensus disorder prediction	454	493	-	-
Gso9g2108	493	PANTHER	OS01G0323000 PROTEIN	1	492	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso9g2108	Gso-Chr9	45382260	45386123	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso9g2108	105	467	Receptor kinase-like Gene Family	AT4G02010	40.584	1.08e-91	293

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-V	Gso9g2108		Pkinase	1.8e-46	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso9g2108	-		-	gmx:100800724	943.34

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Event-related genes

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Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
Gso18g1938	18	51812594	51816414	Gso9g2108	9	45382260	45386123	GST
Gso9g2108	9	45382260	45386123	Gso7g0578	7	6131451	6134789	PCT
Gso9g2108	9	45382260	45386123	Gso16g0266	16	3047437	3051577	PCT
Gso7g0578	7	6131451	6134789	Gso9g2108	9	45382260	45386123	PCT
Gso16g0266	16	3047437	3051577	Gso9g2108	9	45382260	45386123	PCT

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